RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ITGA2BP08514 1039 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 FSHRP23945 695 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 GP5P40197 560 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC18A2Q05940 514 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 NAB1Q13506 487 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 PDPK2PQ6A1A2 396 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 RETSATQ6NUM9 610 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 ZNF449Q6P9G9 518 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 TAX1BP1Q86VP1 789 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 TDHQ8IZJ6 230 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 LPCAT1Q8NF37 534 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 ACDQ96AP0 544 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 RANBP9Q96S59 729 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 CPNE1Q99829 537 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 FAM107BQ9H098 131 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 PCMTD2Q9NV79 361 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 HAUS2Q9NVX0 235 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 GGA2Q9UJY4 613 aa11.02□□□□□ -0.65
PDXDC1-216ENST00000569715 EPOP01588 193 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 CYP17A1P05093 508 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SERPINB9P50453 376 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 PLK1P53350 603 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 MPP1Q00013 466 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC14A2Q15849 920 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 DGKKQ5KSL6 1271 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 TCP10LQ8TDR4 215 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 ASB16Q96NS5 453 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 RBBP8Q99708 897 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 EPN3Q9H201 632 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 COL4A3Q01955 1670 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 TPP1O14773 563 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 PABPC1P11940 636 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 GABRB3P28472 473 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 WEE1P30291 646 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 CTBP1Q13363 440 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 TMEM215Q68D42 235 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 RMDN1Q96DB5 314 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 APOPT1Q96IL0 206 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 CDCA3Q99618 268 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 PAIP2Q9BPZ3 127 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 MCMBPQ9BTE3 642 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 DZANK1Q9NVP4 752 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 DUS2Q9NX74 493 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 EVLQ9UI08 416 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 ZMYM5Q9UJ78 669 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 OR51F1A6NGY5 319 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 PIGNO95427 931 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 ASMTLO95671 621 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC4A1P02730 911 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SRCP12931 536 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 ARSAP15289 507 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC8A1P32418 973 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 CCNFP41002 786 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC1A2P43004 574 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 NEK3P51956 506 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 PGGT1BP53609 377 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 TMPRSS15P98073 1019 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 NSUN2Q08J23 767 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 DHCR24Q15392 516 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 GPR149Q86SP6 731 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SRLQ86TD4 932 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 C12orf40Q86WS4 652 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 OR13C4Q8NGS5 318 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 DYDC1Q8WWB3 177 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 DNAJC1Q96KC8 554 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SUDS3Q9H7L9 328 aaPredicted RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 SSU72Q9NP77 194 aaKnown RBP11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.652e-8■■■□□ 15.8
PDXDC1-216ENST00000569715 TXNDC16Q9P2K2 825 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
PDXDC1-216ENST00000569715 GBP2P32456 591 aaPredicted RBP11□□□□□ -0.65
PDXDC1-216ENST00000569715 EML3Q32P44 896 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 LGSNQ5TDP6 509 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 CMC1Q7Z7K0 106 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 ADIPOR2Q86V24 386 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 CAMK1DQ8IU85 385 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SORCS1Q8WY21 1168 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 VOPP1Q96AW1 172 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 MTBPQ96DY7 904 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SLC13A1Q9BZW2 595 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 CAB39LQ9H9S4 337 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 MTO1Q9Y2Z2 717 aaKnown RBP11□□□□□ -0.65
PDXDC1-216ENST00000569715 KIF26AQ9ULI4 1882 aaPredicted RBP11□□□□□ -0.65
PDXDC1-216ENST00000569715 ERICH4A6NGS2 130 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 OTOL1A6NHN0 477 aaPredicted RBP11□□□□□ -0.65
PDXDC1-216ENST00000569715 LIMK2P53671 638 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 MESP2Q0VG99 397 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 ZNF470Q6ECI4 717 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 FSTL4Q6MZW2 842 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 LVRNQ6Q4G3 990 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 DCLK2Q8N568 766 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 MDGA1Q8NFP4 955 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 BCAS4Q8TDM0 211 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 SMARCD2Q92925 531 aa11□□□□□ -0.65
PDXDC1-216ENST00000569715 ZNF317Q96PQ6 595 aaPredicted RBP11□□□□□ -0.65
PDXDC1-216ENST00000569715 NSUN3Q9H649 340 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms