RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 KIR2DS3K7RE56 304 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 IPO5O00410 1097 aaKnown RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 USP12O75317 370 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 BBOX1O75936 387 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 ACTL6BO94805 426 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 BAIAP3O94812 1187 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 HEXIM1O94992 359 aaKnown RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 LARGE1O95461 756 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 NTN1O95631 604 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBX18O95935 607 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 ITGA2BP08514 1039 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBC1D3HP0C7X1 549 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 LIFRP42702 1097 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TUBP50607 506 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 PLCD1P51178 756 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 FOXO1Q12778 655 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 GRAPQ13588 217 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 PKN2Q16513 984 aaKnown RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 KRT24Q2M2I5 525 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 SMTNL2Q2TAL5 461 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 GALNTL6Q49A17 601 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 ZNF569Q5MCW4 686 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC10A5Q5PT55 438 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 C1QTNF12Q5T7M4 302 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TTC22Q5TAA0 569 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 NUGGCQ68CJ6 796 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBC1D3GQ6DHY5 549 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBC1D3CQ6IPX1 549 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 COPS6Q7L5N1 327 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 HEATR4Q86WZ0 1026 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBC1D3Q8IZP1 549 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 MMP21Q8N119 569 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 GALNT15Q8N3T1 639 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 ESX1Q8N693 406 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 C9orf106Q8NAJ2 232 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC44A5Q8NCS7 719 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 GRAPLQ8TC17 118 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 RILPL2Q969X0 211 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 CLMNQ96JQ2 1002 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TUBB6Q9BUF5 446 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 HTATIP2Q9BUP3 242 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARHGAP39Q9C0H5 1083 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 UNC45AQ9H3U1 944 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 MYOZ2Q9NPC6 264 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 UBN1Q9NPG3 1134 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 IPO11Q9UI26 975 aaKnown RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 HERC5Q9UII4 1024 aaKnown RBP3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 FBXO4Q9UKT5 387 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM98Q9Y2Y6 226 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 PCDHAC2Q9Y5I4 1007 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 MGAMO43451 1857 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 MYH3P11055 1940 aa3.64□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM272A0A1B0GTI8 110 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 CXorf65A6NEN9 183 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 A6NLC8 198 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 K7ENM7 598 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 IRAK2O43187 625 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 GFPT2O94808 682 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 NDUFB8O95169 186 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 EPN2O95208 641 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 TERF1P54274 439 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 AP2B1P63010 937 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 TWIST1Q15672 202 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 TIGD6Q17RP2 521 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 SLC45A4Q5BKX6 768 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARL13AQ5H913 290 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 PIK3CD-AS1Q5SR53 167 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 ATPAF1Q5TC12 328 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 ARMC3Q5W041 872 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 NFRKBQ6P4R8 1299 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 TMEM88Q6PEY1 159 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 KRT77Q7Z794 578 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 LRRTM4Q86VH4 590 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 CPOQ8IVL8 374 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 DDIASQ8IXT1 998 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 OR8H2Q8N162 312 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 FAM47BQ8NA70 645 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBC1D16Q8TBP0 767 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 HDAC2Q92769 488 aaKnown RBP3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 ADAD1Q96M93 576 aaKnown RBP3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 CAMK1GQ96NX5 476 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 BARD1Q99728 777 aaKnown RBP3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 VPS33BQ9H267 617 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 ABHD16BQ9H3Z7 469 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 SPAG4Q9NPE6 437 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 RIC8AQ9NPQ8 531 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 WASH6PQ9NQA3 447 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 SMYD2Q9NRG4 433 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 TBC1D22BQ9NU19 505 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 LIN7CQ9NUP9 197 aaKnown RBP3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 POT1Q9NUX5 634 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 LAMP3Q9UQV4 416 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 AK9Q5TCS8 1911 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 CDHR2Q9BYE9 1310 aa3.63□□□□□ -1.83
HMGB1P6-201ENST00000569046 A0A1B0GUL6 1792 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 MBD3L5A6NJ08 208 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 B4E171 279 aa3.62□□□□□ -1.83
HMGB1P6-201ENST00000569046 RHODO00212 210 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms