RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 MTFMTQ96DP5 389 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 CENPNQ96H22 339 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 TKTL2Q9H0I9 626 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZFP14Q9HCL3 533 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 KLHL1Q9NR64 748 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 RASSF1Q9NS23 344 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 SAMHD1Q9Y3Z3 626 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 TMEM63AO94886 807 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 RHBDL3P58872 404 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 ABATP80404 500 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 ECT2LQ008S8 904 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 GBE1Q04446 702 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 RFX4Q33E94 735 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 ELMSAN1Q6PJG2 1045 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 DCP1BQ8IZD4 617 aaKnown RBP12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 AADATQ8N5Z0 425 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 CCNB1IP1Q9NPC3 277 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
CSPG4P13-202ENST00000567704 THRBP10828 461 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ITGALP20701 1170 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 AKR1D1P51857 326 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 THOP1P52888 689 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 MED22Q15528 200 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 RALGPS2Q86X27 583 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 LPCAT1Q8NF37 534 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 GINS4Q9BRT9 223 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 TBC1D30Q9Y2I9 924 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 FARP1Q9Y4F1 1045 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 KRT87PA6NCN2 255 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ASS1P00966 412 aaKnown RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ADSLP30566 484 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 CLCN5P51795 746 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ATP12AP54707 1039 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 TGFB2P61812 414 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 CCNYL2Q5T2Q4 361 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 DDI2Q5TDH0 399 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 GALNT5Q7Z7M9 940 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PLD5Q8N7P1 536 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ANKRD52Q8NB46 1076 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 WNT8BQ93098 351 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 FAM163AQ96GL9 167 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PPM1MQ96MI6 270 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PORCNQ9H237 461 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 TPK1Q9H3S4 243 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 RNF19AQ9NV58 838 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ENOPH1Q9UHY7 261 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PPP1R11O60927 126 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 FTH1P02794 183 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 IDO1P14902 403 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ENTPD1P49961 510 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 OR12D3Q9UGF7 316 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 PADI4Q9UM07 663 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
CSPG4P13-202ENST00000567704 CSH1P0DML2 217 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 CSH2P0DML3 217 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ITGB5P18084 799 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ITGAXP20702 1163 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 MTHFRP42898 656 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 OXCT1P55809 520 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 CACTIN-AS1Q8N1I8 211 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 LEMD2Q8NC56 503 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 RAB2BQ8WUD1 216 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 NODALQ96S42 347 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 CPXM1Q96SM3 734 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ADGRE3Q9BY15 652 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 DDX43Q9NXZ2 648 aaKnown RBP12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF222Q9UK12 451 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 CARD8Q9Y2G2 431 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 FFAR3O14843 346 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 GPR42O15529 346 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 SLC22A3O75751 556 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 EPN2O95208 641 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 AMHP03971 560 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 NOS2P35228 1153 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ZNF484Q5JVG2 852 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 IL23RQ5VWK5 629 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 SLC9A4Q6AI14 798 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 POTEHQ6S545 545 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 PROSER1Q86XN7 944 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 NXNL1Q96CM4 212 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ULBP1Q9BZM6 244 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 TRIM8Q9BZR9 551 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 MARCH7Q9H992 704 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 ELP3Q9H9T3 547 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 TOR4AQ9NXH8 423 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 MYH10P35580 1976 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 F5H5T6 163 aa12.46□□□□□ -0.41
CSPG4P13-202ENST00000567704 TK2O00142 265 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms