RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NEBLO76041 1014 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 RASGRP1O95267 797 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 GJB6O95452 261 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 CTSEP14091 401 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 SERPINA4P29622 427 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 EIF4A3P38919 411 aaKnown RBP18.8■□□□□ 0.6
LINC01238-205ENST00000567549 CSNK1DP48730 415 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 RFTN1Q14699 578 aaPredicted RBP18.8■□□□□ 0.6
LINC01238-205ENST00000567549 CDKN3Q16667 212 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 DEFB133Q30KQ1 61 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 TMEM52BQ4KMG9 183 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 RAB6CQ53S08 254 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 C6orf132Q5T0Z8 1188 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 CCDC183Q5T5S1 534 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 TMCO4Q5TGY1 634 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 IGF2-ASQ6U949 168 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 LEKR1Q6ZMV7 388 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 EFL1Q7Z2Z2 1120 aaKnown RBP18.8■□□□□ 0.6
LINC01238-205ENST00000567549 PSTKQ8IV42 348 aaKnown RBP18.8■□□□□ 0.6
LINC01238-205ENST00000567549 TRIM11Q96F44 468 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 RAB6CQ9H0N0 254 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 SUV39H2Q9H5I1 410 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 PRORYQ9H606 182 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 ITM2BQ9Y287 266 aa18.8■□□□□ 0.6
LINC01238-205ENST00000567549 SHROOM3Q8TF72 1996 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 BAHCC1Q9P281 2608 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 CFAP69A5D8W1 941 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 SMTNL1A8MU46 457 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 EEF2KO00418 725 aaKnown RBP18.79■□□□□ 0.6
LINC01238-205ENST00000567549 KELP23276 732 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 PSMA2P25787 234 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 IGFALSP35858 605 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 RENBPP51606 427 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 TMPRSS3P57727 454 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 EIF2B5Q13144 721 aaKnown RBP18.79■□□□□ 0.6
LINC01238-205ENST00000567549 UGP2Q16851 508 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 ISXQ2M1V0 245 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 GKN2Q86XP6 184 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 PYROXD2Q8N2H3 581 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 ARL14Q8N4G2 192 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 WRAP53Q9BUR4 548 aaKnown RBP18.79■□□□□ 0.6
LINC01238-205ENST00000567549 BOCQ9BWV1 1114 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 DPH1Q9BZG8 443 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 KCTD5Q9NXV2 234 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 GGT7Q9UJ14 662 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 AP4E1Q9UPM8 1137 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 SCINQ9Y6U3 715 aa18.79■□□□□ 0.6
LINC01238-205ENST00000567549 A0A1W2PQ67 120 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 TCRBV5S1A1TA0A578 114 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 TSPAN11A1L157 253 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 PRPSAP2O60256 369 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 PALMO75781 387 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 TIMP2P16035 220 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 ITPKBP27987 946 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 ADKP55263 362 aaKnown RBP18.78■□□□□ 0.6
LINC01238-205ENST00000567549 RPL7AP62424 266 aaKnown RBP18.78■□□□□ 0.6
LINC01238-205ENST00000567549 C19orf57Q0VDD7 668 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 CCDC173Q0VFZ6 552 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 ERMARDQ5T6L9 678 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 LZTR1Q8N653 840 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 KCNE4Q8WWG9 221 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 CINPQ9BW66 212 aaPredicted RBP18.78■□□□□ 0.6
LINC01238-205ENST00000567549 NOL6Q9H6R4 1146 aaKnown RBP18.78■□□□□ 0.6
LINC01238-205ENST00000567549 SP110Q9HB58 689 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 MRPL47Q9HD33 250 aaKnown RBP18.78■□□□□ 0.6
LINC01238-205ENST00000567549 PCDHB1Q9Y5F3 818 aa18.78■□□□□ 0.6
LINC01238-205ENST00000567549 ATXN7O15265 892 aaPredicted RBP18.77■□□□□ 0.6
LINC01238-205ENST00000567549 PRAMEF11O60813 436 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 MPOP05164 745 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 ATP1A3P13637 1013 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 HK3P52790 923 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 BCL2L1Q07817 233 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 MTM1Q13496 603 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 SPIDRQ14159 915 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 AGERQ15109 404 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 IRF4Q15306 451 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 PPP1R15BQ5SWA1 713 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 GUSBP11Q6P575 273 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 SPACA3Q8IXA5 215 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 BBS5Q8N3I7 341 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 ARL10Q8N8L6 244 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 TP53I13Q8NBR0 393 aaPredicted RBP18.77■□□□□ 0.6
LINC01238-205ENST00000567549 FNIP1Q8TF40 1166 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 LRRC61Q9BV99 259 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 DHX35Q9H5Z1 703 aaKnown RBP18.77■□□□□ 0.6
LINC01238-205ENST00000567549 ZWILCHQ9H900 591 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 LHX3Q9UBR4 397 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 PADI4Q9UM07 663 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 ATP8A1Q9Y2Q0 1164 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 PCDHGA8Q9Y5G5 932 aa18.77■□□□□ 0.6
LINC01238-205ENST00000567549 ASXL3Q9C0F0 2248 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 LY6G6EA0A0G2JKS1 128 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 PDE2AO00408 941 aaPredicted RBP18.76■□□□□ 0.59
LINC01238-205ENST00000567549 MUSKO15146 869 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 SPINT1O43278 529 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 MYBL1P10243 752 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 GZMAP12544 262 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 TLE3Q04726 772 aa18.76■□□□□ 0.59
LINC01238-205ENST00000567549 NSUN2Q08J23 767 aaKnown RBP eCLIP18.76■□□□□ 0.59
LINC01238-205ENST00000567549 EIF3IQ13347 325 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms