RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 TOR1BO14657 336 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 NUDT21O43809 227 aaKnown RBP9.84□□□□□ -0.83
CAPN3-216ENST00000567071 C8BP07358 591 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 ATP1A3P13637 1013 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 CD99P14209 185 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 NR2F2P24468 414 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 CHRNA3P32297 505 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 TKTL1P51854 596 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 HK3P52790 923 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 TPM4P67936 248 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 BIRC2Q13490 618 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 NCOA4Q13772 614 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 ANKS6Q68DC2 871 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 JMJD6Q6NYC1 403 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-216ENST00000567071 HPS6Q86YV9 775 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 CREBRFQ8IUR6 639 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 IQCKQ8N0W5 287 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 CFAP52Q8N1V2 620 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 ESX1Q8N693 406 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 EDEM1Q92611 657 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 C1QTNF7Q9BXJ2 289 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 HSD3B7Q9H2F3 369 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 AGPAT3Q9NRZ7 376 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 ABCC13Q9NSE7 274 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 LUZP4Q9P127 313 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 CROTQ9UKG9 612 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 PCDHGB7Q9Y5F8 929 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 PCDHGA9Q9Y5G4 932 aaKnown RBP9.84□□□□□ -0.83
CAPN3-216ENST00000567071 RPS6KL1Q9Y6S9 549 aa9.84□□□□□ -0.83
CAPN3-216ENST00000567071 PDGFRAP16234 1089 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 EIF4A3P38919 411 aaKnown RBP9.83□□□□□ -0.84
CAPN3-216ENST00000567071 STAT5AP42229 794 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 NUMBP49757 651 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 AP3M2P53677 418 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 TBX4P57082 545 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 SRSF11Q05519 484 aaKnown RBP9.83□□□□□ -0.84
CAPN3-216ENST00000567071 CYP24A1Q07973 514 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 ADAM9Q13443 819 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 MS4A13Q5J8X5 152 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 CDKAL1Q5VV42 579 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 ATL2Q8NHH9 583 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 GOLGA5Q8TBA6 731 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 ASB12Q8WXK4 309 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 KLF6Q99612 283 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-216ENST00000567071 DPYSL5Q9BPU6 564 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 NUDT22Q9BRQ3 303 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 ULBP1Q9BZM6 244 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 UBXN6Q9BZV1 441 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 TWSG1Q9GZX9 223 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 THAP9Q9H5L6 903 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 LRRC4Q9HBW1 653 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 CHST11Q9NPF2 352 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 RCOR3Q9P2K3 495 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-216ENST00000567071 COPG2Q9UBF2 871 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
CAPN3-216ENST00000567071 MRPS18BQ9Y676 258 aaKnown RBP9.83□□□□□ -0.84
CAPN3-216ENST00000567071 CSPG4Q6UVK1 2322 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 IGLON5A6NGN9 336 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 RHPN2P1A8MT19 583 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 B4DGG1 531 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 CETN3O15182 167 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 LRRTM2O43300 516 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 AP1G1O43747 822 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 EXOC3O60645 756 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 ZG16O60844 167 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 KATNA1O75449 491 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 DNAJB5O75953 348 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 STK17BO94768 372 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 ADRB3P13945 408 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 BPIP17213 487 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 CDK11BP21127 795 aaKnown RBP9.82□□□□□ -0.84
CAPN3-216ENST00000567071 RPL13P26373 211 aaKnown RBP9.82□□□□□ -0.84
CAPN3-216ENST00000567071 HTR1BP28222 390 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 ALDH4A1P30038 563 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 SSTR2P30874 369 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 DLSTP36957 453 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 CASP4P49662 377 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 LIMK2P53671 638 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 FKBP3Q00688 224 aaKnown RBP9.82□□□□□ -0.84
CAPN3-216ENST00000567071 CDK18Q07002 472 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 SEMA5AQ13591 1074 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 CHRNA6Q15825 494 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 SGSM1Q2NKQ1 1148 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 CCDC40Q4G0X9 1142 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 RAB41Q5JT25 222 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 BSPRYQ5W0U4 402 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 PM20D1Q6GTS8 502 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 FOXR2Q6PJQ5 311 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 ZNF438Q7Z4V0 828 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 PIGZQ86VD9 579 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 XYLT1Q86Y38 959 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 IRF2BP1Q8IU81 584 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 GLIS1Q8NBF1 620 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 FAM46DQ8NEK8 389 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 KIAA1524Q8TCG1 905 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 GRIN3AQ8TCU5 1115 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 TAF4BQ92750 862 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 PNPLA2Q96AD5 504 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 RTP4Q96DX8 246 aa9.82□□□□□ -0.84
CAPN3-216ENST00000567071 C1QTNF2Q9BXJ5 285 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms