RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KLHL40Q2TBA0 621 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 PRRT3Q5FWE3 981 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 C6orf132Q5T0Z8 1188 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 BROXQ5VW32 411 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 ESRP1Q6NXG1 681 aaKnown RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 GUSBP11Q6P575 273 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 RBM44Q6ZP01 1051 aaKnown RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 DNAAF5Q86Y56 855 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 MCOLN2Q8IZK6 566 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 FSTL5Q8N475 847 aaPredicted RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 SCG3Q8WXD2 468 aaKnown RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 MCEEQ96PE7 176 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 DPH1Q9BZG8 443 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 SUV39H2Q9H5I1 410 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 LRRC19Q9H756 370 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 MBNL1Q9NR56 388 aaKnown RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 THSD1Q9NS62 852 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 SEPT11Q9NVA2 429 aaKnown RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 UBA2Q9UBT2 640 aaPredicted RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 MYO6Q9UM54 1294 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 PCDHGA8Q9Y5G5 932 aa15.15■□□□□ 0.02
RNF40-209ENST00000566703 TDRD6O60522 2096 aaKnown RBP15.15■□□□□ 0.02
RNF40-209ENST00000566703 DSPP15924 2871 aaKnown RBP15.14■□□□□ 0.01
RNF40-209ENST00000566703 YY2O15391 372 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 ITIH2P19823 946 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 MLLT3P42568 568 aaPredicted RBP15.14■□□□□ 0.01
RNF40-209ENST00000566703 LRRC14Q15048 493 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 ELOCQ15369 112 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 BRAT1Q6PJG6 821 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 RBFAQ8N0V3 343 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 ATL2Q8NHH9 583 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 CCDC97Q96F63 343 aaPredicted RBP15.14■□□□□ 0.01
RNF40-209ENST00000566703 WBP1Q96G27 269 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 SLC46A1Q96NT5 459 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 TUBGCP5Q96RT8 1024 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 PDFQ9HBH1 243 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 ASCL3Q9NQ33 180 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 PADI4Q9UM07 663 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 ENTPD2Q9Y5L3 495 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 WDFY3Q8IZQ1 3526 aa15.14■□□□□ 0.01
RNF40-209ENST00000566703 ARHGAP42A6NI28 874 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 INSIG1O15503 277 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 PRAMEF11O60813 436 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 RASGRP1O95267 797 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 ALPIP09923 528 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 TSHRP16473 764 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 TNFAIP3P21580 790 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 HTR1BP28222 390 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 RBMS1P29558 406 aaKnown RBP15.13■□□□□ 0.01
RNF40-209ENST00000566703 HK3P52790 923 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 TPI1P60174 286 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 C1orf61Q13536 156 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 WSCD2Q2TBF2 565 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 ERAP2Q6P179 960 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 APTXQ7Z2E3 356 aaKnown RBP15.13■□□□□ 0.01
RNF40-209ENST00000566703 IRF2BP2Q7Z5L9 587 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 SLC35F3Q8IY50 421 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 NCAPGQ9BPX3 1015 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 EDEM3Q9BZQ6 932 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 CLPBQ9H078 707 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 TCEAL2Q9H3H9 227 aaPredicted RBP15.13■□□□□ 0.01
RNF40-209ENST00000566703 PARVAQ9NVD7 372 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 PNMA8BQ9ULN7 279 aaPredicted RBP15.13■□□□□ 0.01
RNF40-209ENST00000566703 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
RNF40-209ENST00000566703 CAPN8A6NHC0 703 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 MUSKO15146 869 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 CTSEP14091 401 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 ZNF135P52742 658 aaPredicted RBP15.12■□□□□ 0.01
RNF40-209ENST00000566703 TMPRSS3P57727 454 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 CXADRP78310 365 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 OGDHQ02218 1023 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 NSUN2Q08J23 767 aaKnown RBP eCLIP15.12■□□□□ 0.01
RNF40-209ENST00000566703 MAMLD1Q13495 774 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 RFTN1Q14699 578 aaPredicted RBP15.12■□□□□ 0.01
RNF40-209ENST00000566703 NCAPHQ15003 741 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 IRF4Q15306 451 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 STX1AQ16623 288 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 LRRC73Q5JTD7 316 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 PERM1Q5SV97 790 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 CFAP58Q5T655 872 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 PLEKHA7Q6IQ23 1121 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 PSTKQ8IV42 348 aaKnown RBP15.12■□□□□ 0.01
RNF40-209ENST00000566703 NETO2Q8NC67 525 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 OR6C4Q8NGE1 309 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 SNRNP27Q8WVK2 155 aaKnown RBP15.12■□□□□ 0.01
RNF40-209ENST00000566703 KCNE4Q8WWG9 221 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 SYT11Q9BT88 431 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 WRAP53Q9BUR4 548 aaKnown RBP15.12■□□□□ 0.01
RNF40-209ENST00000566703 APOOQ9BUR5 198 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 PCDH12Q9NPG4 1184 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 DOLKQ9UPQ8 538 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 SATB2Q9UPW6 733 aa15.12■□□□□ 0.01
RNF40-209ENST00000566703 BAHCC1Q9P281 2608 aa15.11■□□□□ 0.01
RNF40-209ENST00000566703 J3KR12 359 aa15.11■□□□□ 0.01
RNF40-209ENST00000566703 ERVH48-1M5A8F1 160 aa15.11■□□□□ 0.01
RNF40-209ENST00000566703 EEF2KO00418 725 aaKnown RBP15.11■□□□□ 0.01
RNF40-209ENST00000566703 NTN3O00634 580 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms