RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 RSPH14Q9UHP6 348 aa8.24□□□□□ -1.09
CDH13-208ENST00000566333 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
CDH13-208ENST00000566333 ITM2BQ9Y287 266 aa8.24□□□□□ -1.09
CDH13-208ENST00000566333 FARP1Q9Y4F1 1045 aaPredicted RBP8.24□□□□□ -1.09
CDH13-208ENST00000566333 PCDHGC4Q9Y5F7 938 aa8.24□□□□□ -1.09
CDH13-208ENST00000566333 PCDHGA2Q9Y5H1 932 aa8.24□□□□□ -1.09
CDH13-208ENST00000566333 DNAH14Q0VDD8 3507 aa8.24□□□□□ -1.09
CDH13-208ENST00000566333 ZFC3H1O60293 1989 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 UPK3BL1B0FP48 263 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 UPK3BL2E5RIL1 263 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 H0Y858 1186 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 KIF2AO00139 706 aaPredicted RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 SLC7A4O43246 635 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 HRO43593 1189 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 ZNF500O60304 480 aaPredicted RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 ZNF217O75362 1048 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 NEBLO76041 1014 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 STK10O94804 968 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 METTL18O95568 372 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PRKCGP05129 697 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PDHA1P08559 390 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 SERPINF2P08697 491 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 ATXN1LP0C7T5 689 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 ZSCAN5DPP0CG00 497 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 TIMP2P16035 220 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 CD6P30203 668 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 COILP38432 576 aaPredicted RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 MMP12P39900 470 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PPP2CBP62714 309 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PPP2CAP67775 309 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 RAD51Q06609 339 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 BCL2L1Q07817 233 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 ITKQ08881 620 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 RALGDSQ12967 914 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 OLIG2Q13516 323 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PTPRRQ15256 657 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 FAXCQ5TGI0 409 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 KCTD11Q693B1 232 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 ITPRIPL1Q6GPH6 555 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 BRAT1Q6PJG6 821 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 CCDC137Q6PK04 289 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 FAM124AQ86V42 546 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 KBTBD6Q86V97 674 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PGBD3Q8N328 593 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PIH1D2Q8WWB5 315 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 SLCO2A1Q92959 643 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 MAGOHBQ96A72 148 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 TOE1Q96GM8 510 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 PPP1R16AQ96I34 528 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 MRGPRX2Q96LB1 330 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 SMIM14Q96QK8 99 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 MCCC1Q96RQ3 725 aaPredicted RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 DDX47Q9H0S4 455 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 NEUROG2Q9H2A3 272 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 PCDH9Q9HC56 1237 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 HOMER3Q9NSC5 361 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 HAUS2Q9NVX0 235 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 UBP1Q9NZI7 540 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 ZNF148Q9UQR1 794 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 INVSQ9Y283 1065 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 DRG1Q9Y295 367 aaKnown RBP8.23□□□□□ -1.09
CDH13-208ENST00000566333 RAI2Q9Y5P3 530 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 FADS3Q9Y5Q0 445 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 MRFAP1Q9Y605 127 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 R4GN57 208 aa8.23□□□□□ -1.09
CDH13-208ENST00000566333 CEP250Q9BV73 2442 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 CABIN1Q9Y6J0 2220 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 PIKFYVEQ9Y2I7 2098 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 NPIPB15A6NHN6 443 aaPredicted RBP8.22□□□□□ -1.09
CDH13-208ENST00000566333 ESPNB1AK53 854 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 AP1G1O43747 822 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 PMPCBO75439 489 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 RPP40O75818 363 aaKnown RBP8.22□□□□□ -1.09
CDH13-208ENST00000566333 SEMA4FO95754 770 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 CPP00450 1065 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 IFNB1P01574 187 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 TUBB4AP04350 444 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 IGHV4-34P06331 123 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 ACADMP11310 421 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 ITIH2P19823 946 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 LHCGRP22888 699 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 CES1P23141 567 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 STIP1P31948 543 aaKnown RBP8.22□□□□□ -1.09
CDH13-208ENST00000566333 RPL22P35268 128 aaKnown RBP8.22□□□□□ -1.09
CDH13-208ENST00000566333 ADRA1AP35348 466 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 PTGIRP43119 386 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 CHRNA4P43681 627 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 WNT3AP56704 352 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 SEMA5AQ13591 1074 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 GALNT3Q14435 633 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 UGP2Q16851 508 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 USP39Q53GS9 565 aaKnown RBP8.22□□□□□ -1.09
CDH13-208ENST00000566333 ARMC12Q5T9G4 340 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 PMS2CLQ68D20 193 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.22□□□□□ -1.09
CDH13-208ENST00000566333 ARHGEF18Q6ZSZ5 1173 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 PID1Q7Z2X4 250 aa8.22□□□□□ -1.09
CDH13-208ENST00000566333 SLC41A1Q8IVJ1 513 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms