RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FAM237BA0A1B0GVD1 139 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PIGNO95427 931 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PRLP01236 227 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 POLBP06746 335 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ASGR2P07307 311 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PDHA1P08559 390 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ALADP13716 330 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 GKP32189 559 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 STX2P32856 288 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF844Q08AG5 666 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 STAT4Q14765 748 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 GRM3Q14832 879 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 CEP85LQ5SZL2 805 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ARMC12Q5T9G4 340 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ARMC3Q5W041 872 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 LPCAT1Q8NF37 534 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 OR2A12Q8NGT7 310 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 FBF1Q8TES7 1133 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PTCD2Q8WV60 388 aaKnown RBP18.89■□□□□ 0.61
COMMD4-213ENST00000565834 DNASE1L2Q92874 299 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 P2RY13Q9BPV8 354 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 KIFC1Q9BW19 673 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 CPEB1Q9BZB8 566 aaKnown RBP18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ZDHHC6Q9H6R6 413 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PLAC1Q9HBJ0 212 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PCDHB9Q9Y5E1 797 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 RPS6KL1Q9Y6S9 549 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 F5P12259 2224 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 TCRBV9S1A1TA0A576 114 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 SPECC1L-ADORA2AF8WAN1 911 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 AGPSO00116 658 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ADRA1DP25100 572 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 CTHP32929 405 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 GALK1P51570 392 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 SEPT6Q14141 434 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF234Q14588 700 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 CRYMQ14894 314 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 SPANXN3Q5MJ09 141 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 PAF1Q8N7H5 531 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF669Q96BR6 464 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-213ENST00000565834 RANBP9Q96S59 729 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 ACSS3Q9H6R3 686 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 TCAF1Q9Y4C2 921 aa18.89■□□□□ 0.61
COMMD4-213ENST00000565834 TCF20Q9UGU0 1960 aaKnown RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 HEATR9A2RTY3 570 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 WASH3PC4AMC7 463 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 TRAFD1O14545 582 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 HTRA2O43464 458 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 FZD6O60353 706 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 USP1O94782 785 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 PGLSO95336 258 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 IVLP07476 585 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 EPHB1P54762 984 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 GPS2Q13227 327 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 MSLNQ13421 630 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 PKN3Q6P5Z2 889 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 TMEM135Q86UB9 458 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 CHST14Q8NCH0 376 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 HEPHQ9BQS7 1158 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 C8orf33Q9H7E9 229 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 MRM3Q9HC36 420 aaKnown RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 FBRSL1Q9HCM7 1045 aaKnown RBP18.88■□□□□ 0.61
COMMD4-213ENST00000565834 RABGEF1Q9UJ41 708 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 PIAS3Q9Y6X2 628 aa18.88■□□□□ 0.61
COMMD4-213ENST00000565834 EXOC1LA0A1B0GW35 172 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 ANKRD66B4E2M5 251 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 OPA1O60313 960 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 IL9P15248 144 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 RPL26P61254 145 aaKnown RBP18.87■□□□□ 0.61
COMMD4-213ENST00000565834 TFF2Q03403 129 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 KLHL38Q2WGJ6 581 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 KRT71Q3SY84 523 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 ANKRD20A4Q4UJ75 823 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 CES3Q6UWW8 571 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 SERPINA13PQ6UXR4 307 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 RALGPS2Q86X27 583 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-213ENST00000565834 GOLGA6L1Q8N7Z2 621 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 ZNF366Q8N895 744 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 BLOC1S5Q8TDH9 187 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 PTPRN2Q92932 1015 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 CYTH2Q99418 400 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 TMEM109Q9BVC6 243 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 ROPN1BQ9BZX4 212 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-213ENST00000565834 MTG2Q9H4K7 406 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 ROPN1Q9HAT0 212 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-213ENST00000565834 HEBP1Q9NRV9 189 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 THAP10Q9P2Z0 257 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-213ENST00000565834 PRKAG3Q9UGI9 489 aa18.87■□□□□ 0.61
COMMD4-213ENST00000565834 RPL26L1Q9UNX3 145 aaKnown RBP18.87■□□□□ 0.61
COMMD4-213ENST00000565834 EDDM13A0A1B0GTR0 161 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 GOLGA6L10A6NI86 522 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 TNFRSF4P43489 277 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 GRIA4P48058 902 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 PFKPQ01813 784 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 LAMB3Q13751 1172 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 E2F5Q15329 346 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 QPCTQ16769 361 aa18.86■□□□□ 0.61
COMMD4-213ENST00000565834 LONRF1Q17RB8 773 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms