RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KRT39Q6A163 491 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 LCLAT1Q6UWP7 414 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 BEND5Q7L4P6 421 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 TP53INP2Q8IXH6 220 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 UNC5BQ8IZJ1 945 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 FAM149B1Q96BN6 582 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 DPYSL5Q9BPU6 564 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 MMRN2Q9H8L6 949 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 TMEM8AQ9HCN3 771 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 MBNL1Q9NR56 388 aaKnown RBP9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 RAB20Q9NX57 234 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 ERRFI1Q9UJM3 462 aaPredicted RBP9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 POLHQ9Y253 713 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 WASF2Q9Y6W5 498 aa9.16□□□□□ -0.94
VPS9D1-205ENST00000565452 C16orf96A6NNT2 1141 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 O00370 1275 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CALUO43852 315 aaPredicted RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 GABBR2O75899 941 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 TRUB2O95900 331 aaKnown RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CCR1P32246 355 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 IGFALSP35858 605 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CDH4P55283 916 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 MRPL49Q13405 166 aaKnown RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 BIRC2Q13490 618 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 PNOCQ13519 176 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 STIM1Q13586 685 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CNGA2Q16280 664 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CT47A1Q5JQC4 288 aaPredicted RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 ATP1A1-AS1Q5TC04 95 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 SYPL2Q5VXT5 272 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 ANKS6Q68DC2 871 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 SP5Q6BEB4 398 aaPredicted RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 FOXR2Q6PJQ5 311 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 PARS2Q7L3T8 475 aaKnown RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 TTC7BQ86TV6 843 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 TAC4Q86UU9 113 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 FAM129CQ86XR2 697 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 IRF2BP1Q8IU81 584 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 GRAMD1CQ8IYS0 662 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 GUF1Q8N442 669 aaKnown RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 OR4D9Q8NGE8 314 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 OR52K2Q8NGK3 314 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CLEC4CQ8WTT0 213 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 PDCD6IPQ8WUM4 868 aaKnown RBP9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 PMEPA1Q969W9 287 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 TCTN2Q96GX1 697 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 APOOQ9BUR5 198 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 SPRY4Q9C004 299 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CEP44Q9C0F1 390 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 NUP62CLQ9H1M0 184 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 CLSTN2Q9H4D0 955 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 MAP10Q9P2G4 905 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 KLQ9UEF7 1012 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 VPS51Q9UID3 782 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 ENTPD4Q9Y227 616 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 TRPM6Q9BX84 2022 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 NF1P21359 2839 aa9.15□□□□□ -0.94
VPS9D1-205ENST00000565452 ARHGAP10A1A4S6 786 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 STX10O60499 249 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 SNAP91O60641 907 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 MMP20O60882 483 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 RHOCP08134 193 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 TRIM49P0CI25 452 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 TRIM49CP0CI26 452 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 PRF1P14222 555 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 CD1CP29017 333 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 CASP1P29466 404 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 GPR3P46089 330 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 STK4Q13043 487 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 ERV3-1Q14264 604 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 LRRC14Q15048 493 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 STILQ15468 1287 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 NFIL3Q16649 462 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 ZXDCQ2QGD7 858 aaPredicted RBP9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 KLHL40Q2TBA0 621 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 ZNF805Q5CZA5 627 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 RETSATQ6NUM9 610 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 C22orf39Q6P5X5 142 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 CEACAM20Q6UY09 585 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 LINGO4Q6UY18 593 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 ESX1Q8N693 406 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 PCDH20Q8N6Y1 951 aaKnown RBP9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 FBXL13Q8NEE6 735 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 GPT2Q8TD30 523 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 CXorf40AQ8TE69 158 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 SEMA4DQ92854 862 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 RTP4Q96DX8 246 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 EEF2KMTQ96G04 330 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 NUDT22Q9BRQ3 303 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 KCTD10Q9H3F6 313 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 POPDC2Q9HBU9 364 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 OCIAD1Q9NX40 245 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 HECAQ9UBI9 543 aaPredicted RBP9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 VANGL2Q9ULK5 521 aa9.14□□□□□ -0.95
VPS9D1-205ENST00000565452 DGKBQ9Y6T7 804 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms