RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 APOLD1Q96LR9 279 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 NSMCE3Q96MG7 304 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 ZNF641Q96N77 438 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 TUBGCP5Q96RT8 1024 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 CINPQ9BW66 212 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 THAP2Q9H0W7 228 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 TCEAL2Q9H3H9 227 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 SUV39H2Q9H5I1 410 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 ZWILCHQ9H900 591 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 MRPL47Q9HD33 250 aaKnown RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 PCDH12Q9NPG4 1184 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 IPO11Q9UI26 975 aaKnown RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 LRRK1Q38SD2 2015 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 LAMA5O15230 3695 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 MYLKQ15746 1914 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 A0A087X0T9 212 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 NEMP2A6NFY4 417 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
CMTM3-209ENST00000565003 PALMO75781 387 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 GYPCP04921 128 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 FAM228BP0C875 321 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 CKMT1AP12532 417 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 C6P13671 934 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 JUNDP17535 347 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 XPAP23025 273 aaPredicted RBP10.12□□□□□ -0.79
CMTM3-209ENST00000565003 MMP12P39900 470 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 CSNK1DP48730 415 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 HCAR3P49019 387 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 SUOXP51687 545 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 ZNF135P52742 658 aaPredicted RBP10.12□□□□□ -0.79
CMTM3-209ENST00000565003 TPM4P67936 248 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 ZBED6P86452 979 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 SEMG2Q02383 582 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 IL10RBQ08334 325 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 ELP6Q0PNE2 266 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 GRM3Q14832 879 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 DPYSL2Q16555 572 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 BRAT1Q6PJG6 821 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 C19orf48Q6RUI8 117 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 POLNQ7Z5Q5 900 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 SRLQ86TD4 932 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 DCBLD1Q8N8Z6 715 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 FAM181AQ8N9Y4 354 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 HCAR2Q8TDS4 363 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 CPLX3Q8WVH0 158 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 HSPH1Q92598 858 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 LRRC61Q9BV99 259 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.12□□□□□ -0.79
CMTM3-209ENST00000565003 ETNK2Q9NVF9 386 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 CAPN11Q9UMQ6 739 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 ATP8A1Q9Y2Q0 1164 aa10.12□□□□□ -0.79
CMTM3-209ENST00000565003 BZW2Q9Y6E2 419 aaKnown RBP10.12□□□□□ -0.79
CMTM3-209ENST00000565003 ANKRD36A6QL64 1941 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 URB1O60287 2271 aaKnown RBP10.11□□□□□ -0.79
CMTM3-209ENST00000565003 GOLGA6L19H0YKK7 550 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 H3BRJ5 948 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 AQP9O43315 295 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 GCATO75600 419 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 SERPING1P05155 500 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 CYP1A2P05177 515 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 RARAP10276 462 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 ALPPL2P10696 532 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 AMPD1P23109 780 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 SERPINA4P29622 427 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 EIF4A3P38919 411 aaKnown RBP10.11□□□□□ -0.79
CMTM3-209ENST00000565003 THOP1P52888 689 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 YPEL5P62699 121 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 SLC25A11Q02978 314 aaKnown RBP10.11□□□□□ -0.79
CMTM3-209ENST00000565003 SLC10A7Q0GE19 358 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 RALGDSQ12967 914 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 RFTN1Q14699 578 aaPredicted RBP10.11□□□□□ -0.79
CMTM3-209ENST00000565003 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
CMTM3-209ENST00000565003 ACAP1Q15027 740 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 LRRC14Q15048 493 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 WSCD2Q2TBF2 565 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 DEFB133Q30KQ1 61 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 CFAP58Q5T655 872 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 ERAP2Q6P179 960 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 TMCO3Q6UWJ1 677 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 MACC1Q6ZN28 852 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 PHACTR4Q8IZ21 702 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 NIPA2Q8N8Q9 360 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 LMX1AQ8TE12 382 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 ECHDC3Q96DC8 303 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 NXPE2Q96DL1 559 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 CSPG4P5Q96PW8 444 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 PSKH2Q96QS6 385 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 DUSP23Q9BVJ7 150 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 NUP85Q9BW27 656 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 C1QTNF7Q9BXJ2 289 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 ATP13A3Q9H7F0 1226 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 IFNKQ9P0W0 207 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 APOBEC3BQ9UH17 382 aaKnown RBP10.11□□□□□ -0.79
CMTM3-209ENST00000565003 ANAPC7Q9UJX3 599 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 NENFQ9UMX5 172 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 CLCA2Q9UQC9 943 aa10.11□□□□□ -0.79
CMTM3-209ENST00000565003 CSNK1G3Q9Y6M4 447 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms