RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 UGP2Q16851 508 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 LRRC73Q5JTD7 316 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 PRAMEF14Q5SWL7 426 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-206ENST00000564557 LRRC38Q5VT99 294 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 PIP4P1Q86T03 277 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 CAMK1DQ8IU85 385 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 TXLNBQ8N3L3 684 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 PDCD6IPQ8WUM4 868 aaKnown RBP13.8□□□□□ -0.2
CNOT1-206ENST00000564557 RAPGEF5Q92565 580 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
CNOT1-206ENST00000564557 RNF157Q96PX1 679 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 BAG1Q99933 345 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-206ENST00000564557 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 ITM2BQ9Y287 266 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 CA5BQ9Y2D0 317 aa13.8□□□□□ -0.2
CNOT1-206ENST00000564557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.8□□□□□ -0.2
CNOT1-206ENST00000564557 A0A1B0GTQ1 180 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 A0A1W2PQ67 120 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 SOWAHDA6NJG2 315 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 A6NNZ2 444 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 C10orf142B7Z368 130 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 APOL1O14791 398 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 MFSD11O43934 449 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 LZTS3O60299 673 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 MMP20O60882 483 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 ZFXP17010 805 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 GARSP41250 739 aaKnown RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 GRK6P43250 576 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 RGRP47804 291 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 FAM193AP78312 1265 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 TMEM259Q4ZIN3 620 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 NCBP2-AS2Q69YL0 99 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 PTAR1Q7Z6K3 402 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 RFX6Q8HWS3 928 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 DCP2Q8IU60 420 aaKnown RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 CAMK1GQ96NX5 476 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 CDC6Q99741 560 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 WRAP53Q9BUR4 548 aaKnown RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 C1QTNF2Q9BXJ5 285 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 NT5MQ9NPB1 228 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 HYOU1Q9Y4L1 999 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 TTLL3Q9Y4R7 772 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 HEY1Q9Y5J3 304 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 ALG6Q9Y672 507 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 DMXL1Q9Y485 3027 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
CNOT1-206ENST00000564557 CNOT1A5YKK6 2376 aaKnown RBP13.79□□□□□ -0.2
CNOT1-206ENST00000564557 A0A0A6YYK5 440 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-206ENST00000564557 SPAARA0A1B0GVQ0 90 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 AREL1O15033 823 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 PCDHGA12O60330 932 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 BUB1BO60566 1050 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-206ENST00000564557 MAP3K6O95382 1288 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 KRT10P13645 584 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 CCNCP24863 283 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 CDC25BP30305 580 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 RABIFP47224 123 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 HADHBP55084 474 aaKnown RBP13.78□□□□□ -0.2
CNOT1-206ENST00000564557 CLDN2P57739 230 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 GALNT2Q10471 571 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 RALGPS1Q5JS13 557 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 Q6ZSR6 202 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 DAAM2Q86T65 1068 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 VSIG1Q86XK7 387 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 NDUFAF2Q8N183 169 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 TMEM145Q8NBT3 493 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 DENND6BQ8NEG7 585 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 ASB12Q8WXK4 309 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 FAF2Q96CS3 445 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-206ENST00000564557 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 PCDH12Q9NPG4 1184 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 RBM22Q9NW64 420 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNOT1-206ENST00000564557 GGT7Q9UJ14 662 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 DOCK9Q9BZ29 2069 aa13.78□□□□□ -0.2
CNOT1-206ENST00000564557 TSPAN11A1L157 253 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 ZNF487B1APH4 448 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 MUSKO15146 869 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 MATN3O15232 486 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 PSTPIP1O43586 416 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 SOCS5O75159 536 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 ITIH2P19823 946 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 CES1P23141 567 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 THOP1P52888 689 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 EMP3P54852 163 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 MAXP61244 160 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 FOXC1Q12948 553 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 TFDP2Q14188 446 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 TMEM52BQ4KMG9 183 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
CNOT1-206ENST00000564557 GATAD2AQ86YP4 633 aa13.77□□□□□ -0.21
CNOT1-206ENST00000564557 CCDC50Q8IVM0 306 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms