RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 LOC102724159A0A0B4J2E5 919 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 DENND3A2RUS2 1198 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 EIF3FO00303 357 aaPredicted RBP4.94□□□□□ -1.62
UBR1-205ENST00000564540 DDNO94850 711 aaPredicted RBP4.94□□□□□ -1.62
UBR1-205ENST00000564540 SLC2A4P14672 509 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 CLDN2P57739 230 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 UBE3AQ05086 875 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 ARHGEF6Q15052 776 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 PWP2Q15269 919 aaKnown RBP4.94□□□□□ -1.62
UBR1-205ENST00000564540 SOWAHAQ2M3V2 549 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 FAM69BQ5VUD6 431 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 BBS12Q6ZW61 710 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 TBC1D26Q86UD7 250 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 FAM160B2Q86V87 743 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 GJC3Q8NFK1 279 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 HERVK_113Q902F9 699 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 ERGIC1Q969X5 290 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 SCMH1Q96GD3 660 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 IGSF21Q96ID5 467 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 NUF2Q9BZD4 464 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 CTNNAL1Q9UBT7 734 aa4.94□□□□□ -1.62
UBR1-205ENST00000564540 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 A0A0U1RQF3 1178 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 hDV102S1A0JD36 115 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 NPIPB11E5RHQ5 1161 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 SLC16A5O15375 505 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 ZNF8P17098 575 aaPredicted RBP4.93□□□□□ -1.62
UBR1-205ENST00000564540 CHRNDQ07001 517 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 KLHL24Q6TFL4 600 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 SHFQ7M4L6 423 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 CUZD1Q86UP6 607 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 KIAA2013Q8IYS2 634 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 PLD5Q8N7P1 536 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 ZC3HAV1LQ96H79 300 aaKnown RBP4.93□□□□□ -1.62
UBR1-205ENST00000564540 SNTG1Q9NSN8 517 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 BABAM1Q9NWV8 329 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 IL1RAPL1Q9NZN1 696 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 ICAM5Q9UMF0 924 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 A3GALT2U3KPV4 340 aa4.93□□□□□ -1.62
UBR1-205ENST00000564540 A0A087WYN8 130 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 HSPA12AO43301 675 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 ZNF432O94892 652 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 DAOP14920 347 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 PTPN2P17706 415 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 ITGAXP20702 1163 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 NR1H2P55055 460 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 YWHAZP63104 245 aaKnown RBP4.92□□□□□ -1.62
UBR1-205ENST00000564540 DLG1Q12959 904 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 SNTA1Q13424 505 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 LRRC8EQ6NSJ5 796 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 ANKRD18AQ8IVF6 992 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 DNASE2BQ8WZ79 361 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 LRFN5Q96NI6 719 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 DUX5Q96PT3 197 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 CSF3RQ99062 836 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 NOX4Q9NPH5 578 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 SLC9A2Q9UBY0 812 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.92□□□□□ -1.62
UBR1-205ENST00000564540 NFS1Q9Y697 457 aa4.92□□□□□ -1.62
UBR1-205ENST00000564540 KLK8O60259 260 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 LDB3O75112 727 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 URODP06132 367 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 SNRNP70P08621 437 aaKnown RBP4.91□□□□□ -1.62
UBR1-205ENST00000564540 IGHV4-30-4P0DP06 118 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 PGM1P36871 562 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 PEX5P50542 639 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 NFIL3Q16649 462 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 ZNF718Q3SXZ3 478 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 SERTAD4-AS1Q5TG53 156 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 SLC22A25Q6T423 547 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 NEK10Q6ZWH5 1172 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 GPAT4Q86UL3 456 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 NOXA1Q86UR1 476 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 LRRTM4Q86VH4 590 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 ZC3HC1Q86WB0 502 aaKnown RBP4.91□□□□□ -1.62
UBR1-205ENST00000564540 SPATA20Q8TB22 786 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 SNAPC3Q92966 411 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 PKP4Q99569 1192 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 LBHD1Q9BQE6 289 aaPredicted RBP4.91□□□□□ -1.62
UBR1-205ENST00000564540 HEMGNQ9BXL5 484 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 TMEM160Q9NX00 188 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 CISD1Q9NZ45 108 aaKnown RBP4.91□□□□□ -1.62
UBR1-205ENST00000564540 KCNG2Q9UJ96 466 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 SNX9Q9Y5X1 595 aa4.91□□□□□ -1.62
UBR1-205ENST00000564540 CPED1A4D0V7 1026 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 ZIC3O60481 467 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 PCNAP12004 261 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 CNTFP26441 200 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 EFNA5P52803 228 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 HYAL1Q12794 435 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 EFNB3Q15768 340 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 TNIP2Q8NFZ5 429 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 WFIKKN2Q8TEU8 576 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 OTULINQ96BN8 352 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 MXRA8Q9BRK3 442 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 KIAA1456Q9P272 454 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 NFE2L3Q9Y4A8 694 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 DGKBQ9Y6T7 804 aa4.9□□□□□ -1.63
UBR1-205ENST00000564540 SAA2-SAA4A0A096LPE2 208 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms