RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 RNASEH1O60930 286 aaKnown RBP12.92□□□□□ -0.34
CLK3-214ENST00000564096 PIGNO95427 931 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 TTC4O95801 387 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 AGTP01019 485 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 EGFP01133 1207 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 UGT2B4P06133 528 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 FAM153BP0C7A2 387 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 ATXN1LP0C7T5 689 aaKnown RBP12.92□□□□□ -0.34
CLK3-214ENST00000564096 XPAP23025 273 aaPredicted RBP12.92□□□□□ -0.34
CLK3-214ENST00000564096 PRKCHP24723 683 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 MGAT1P26572 445 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 TIE1P35590 1138 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 POLR2LP62875 67 aaKnown RBP12.92□□□□□ -0.34
CLK3-214ENST00000564096 CBLBQ13191 982 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 ENPP2Q13822 863 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 GALNT3Q14435 633 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 FAM153CQ494X1 144 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 FNBP1LQ5T0N5 605 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 DENND2CQ68D51 928 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 RANBP10Q6VN20 620 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 GDPD4Q6W3E5 623 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 USP45Q70EL2 814 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 NLRP9Q7RTR0 991 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 KDELC2Q7Z4H8 507 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 CAMK1DQ8IU85 385 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 FBXO36Q8NEA4 188 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 TRIB3Q96RU7 358 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 ACBD3Q9H3P7 528 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 CDC42EP4Q9H3Q1 356 aaKnown RBP12.92□□□□□ -0.34
CLK3-214ENST00000564096 DYRK4Q9NR20 520 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 SYBUQ9NX95 663 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 HACD3Q9P035 362 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 WNT16Q9UBV4 365 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 ZC3H7BQ9UGR2 993 aaKnown RBP12.92□□□□□ -0.34
CLK3-214ENST00000564096 CHMP2BQ9UQN3 213 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 CHKBQ9Y259 395 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 PCDHB9Q9Y5E1 797 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 PCDHGC4Q9Y5F7 938 aa12.92□□□□□ -0.34
CLK3-214ENST00000564096 MAGEB16A2A368 324 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 K7EQS6 105 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 SIN3BO75182 1162 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 AVILO75366 819 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 LEFTY1O75610 366 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 CRTAMO95727 393 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 GSTA2P09210 222 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 HLA-EP13747 358 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 PAMP19021 973 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 NTSR1P30989 418 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 STX2P32856 288 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 ELK3P41970 407 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 GRIA1P42261 906 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 KIR2DL1P43626 348 aaPredicted RBP12.91□□□□□ -0.34
CLK3-214ENST00000564096 PDE1BQ01064 536 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 MTM1Q13496 603 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 OLIG2Q13516 323 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 SEPT6Q14141 434 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 PCID2Q5JVF3 399 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 SIRPB2Q5JXA9 342 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 EOGTQ5NDL2 527 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 BEND6Q5SZJ8 279 aaPredicted RBP12.91□□□□□ -0.34
CLK3-214ENST00000564096 FAM46CQ5VWP2 391 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 SFTPA1Q8IWL2 248 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 SYNPOQ8N3V7 929 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 ZNF366Q8N895 744 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 CHST14Q8NCH0 376 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 HCAR2Q8TDS4 363 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 SPOCK2Q92563 424 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 PTPRN2Q92932 1015 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 PWWP2AQ96N64 755 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 RANBP9Q96S59 729 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 RUFY1Q96T51 708 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 EBNA1BP2Q99848 306 aaKnown RBP12.91□□□□□ -0.34
CLK3-214ENST00000564096 GABRG3Q99928 467 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 PABPC3Q9H361 631 aaKnown RBP12.91□□□□□ -0.34
CLK3-214ENST00000564096 SUV39H2Q9H5I1 410 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 VPS37BQ9H9H4 285 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 MRM3Q9HC36 420 aaKnown RBP12.91□□□□□ -0.34
CLK3-214ENST00000564096 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
CLK3-214ENST00000564096 CA14Q9ULX7 337 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
CLK3-214ENST00000564096 TSPAN11A1L157 253 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 CAPN8A6NHC0 703 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
CLK3-214ENST00000564096 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
CLK3-214ENST00000564096 FZD6O60353 706 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 RNF40O75150 1001 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 ACSL3O95573 720 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 KLF8O95600 359 aaPredicted RBP12.9□□□□□ -0.34
CLK3-214ENST00000564096 POLBP06746 335 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 ABHD2P08910 425 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 HOXB2P14652 356 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 ITGB7P26010 798 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 CHRNA4P43681 627 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 SUOXP51687 545 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 CCDC15Q0P6D6 951 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 CCINQ13939 588 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 POU6F1Q14863 301 aa12.9□□□□□ -0.34
CLK3-214ENST00000564096 MSS51Q4VC12 460 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms