RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 DDX56Q9NY93 547 aaKnown RBP20.05■□□□□ 0.8
CMTM3-207ENST00000564060 ITM2BQ9Y287 266 aa20.05■□□□□ 0.8
CMTM3-207ENST00000564060 SPAARA0A1B0GVQ0 90 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 LRRD1A4D1F6 860 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 IGLON5A6NGN9 336 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 KDELR1P24390 212 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 EPHA8P29322 1005 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 GARSP41250 739 aaKnown RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 MMP13P45452 471 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 NOP2P46087 812 aaKnown RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 RABIFP47224 123 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 HADHBP55084 474 aaKnown RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 SHC2P98077 582 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 IL9RQ01113 521 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 GALNT2Q10471 571 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 IFI16Q16666 785 aaKnown RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 TMEM52BQ4KMG9 183 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 GCNT7Q6ZNI0 430 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 PTAR1Q7Z6K3 402 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 GAS2L3Q86XJ1 694 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 SPATS2Q86XZ4 545 aaKnown RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 CPNE8Q86YQ8 564 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 RHOT1Q8IXI2 618 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 BAHD1Q8TBE0 780 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 NUDCD1Q96RS6 583 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 MGME1Q9BQP7 344 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 SCUBE2Q9NQ36 999 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 GGT7Q9UJ14 662 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 APOBEC2Q9Y235 224 aaKnown RBP20.04■□□□□ 0.8
CMTM3-207ENST00000564060 CA5BQ9Y2D0 317 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 ATP8A1Q9Y2Q0 1164 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 NCOR2Q9Y618 2525 aa20.04■□□□□ 0.8
CMTM3-207ENST00000564060 SPINT1O43278 529 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 SPOPO43791 374 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 SOCS5O75159 536 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 PEX11BO96011 259 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 FOXC1Q12948 553 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 FGL2Q14314 439 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 LRRC73Q5JTD7 316 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 OR13H1Q8NG92 308 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 SAP25Q8TEE9 199 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 FATE1Q969F0 183 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 ECHDC3Q96DC8 303 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 IFT43Q96FT9 208 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 CALR3Q96L12 384 aaKnown RBP20.03■□□□□ 0.8
CMTM3-207ENST00000564060 MAK16Q9BXY0 300 aaKnown RBP20.03■□□□□ 0.8
CMTM3-207ENST00000564060 AMACRQ9UHK6 382 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 PCDHA13Q9Y5I0 950 aa20.03■□□□□ 0.8
CMTM3-207ENST00000564060 A0A0A6YYK5 440 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-207ENST00000564060 CFAP69A5D8W1 941 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 TOR1BO14657 336 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 RIOK3O14730 519 aaKnown RBP20.02■□□□□ 0.8
CMTM3-207ENST00000564060 MUSKO15146 869 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 BUB1BO60566 1050 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-207ENST00000564060 NEBLO76041 1014 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 CCNCP24863 283 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 CLDN2P57739 230 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 PRAMEF14Q5SWL7 426 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 Q6ZSR6 202 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 SPOCK2Q92563 424 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 RAPGEF5Q92565 580 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 TSGA13Q96PP4 275 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 RNF157Q96PX1 679 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 PCDH12Q9NPG4 1184 aa20.02■□□□□ 0.8
CMTM3-207ENST00000564060 EPN1Q9Y6I3 576 aaPredicted RBP20.02■□□□□ 0.8
CMTM3-207ENST00000564060 PSTPIP1O43586 416 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 MMP20O60882 483 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 NDUFA10O95299 355 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 KRT1P04264 644 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 ZFXP17010 805 aaPredicted RBP20.01■□□□□ 0.79
CMTM3-207ENST00000564060 CR2P20023 1033 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 FECHP22830 423 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 MMP12P39900 470 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 FAM193AP78312 1265 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 SHBQ15464 509 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 GATAD2AQ86YP4 633 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 TEX26Q8N6G2 289 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 HDAC11Q96DB2 347 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 BMFQ96LC9 184 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 KLF6Q99612 283 aaPredicted RBP20.01■□□□□ 0.79
CMTM3-207ENST00000564060 WRAP53Q9BUR4 548 aaKnown RBP20.01■□□□□ 0.79
CMTM3-207ENST00000564060 POLR1EQ9GZS1 481 aaKnown RBP20.01■□□□□ 0.79
CMTM3-207ENST00000564060 GPR27Q9NS67 375 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 FTSJ1Q9UET6 329 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 BTBD3Q9Y2F9 522 aa20.01■□□□□ 0.79
CMTM3-207ENST00000564060 POM121BA6NF01 834 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 GOLGA6L6A8MZA4 724 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 H3BM21 787 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 TRAFD1O14545 582 aaPredicted RBP20■□□□□ 0.79
CMTM3-207ENST00000564060 MATN3O15232 486 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 RAD51BO15315 384 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 TNFSF14O43557 240 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 FTH1P19P0C7X4 201 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 COMTP21964 271 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 CES1P23141 567 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 CDC25BP30305 580 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 YPEL5P62699 121 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 PTK2BQ14289 1009 aa20■□□□□ 0.79
CMTM3-207ENST00000564060 PQLC3Q8N755 202 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms