RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GFRALQ6UXV0 394 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 MMS22LQ6ZRQ5 1243 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 C1orf186Q6ZWK4 172 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 DMRTC2Q8IXT2 367 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 BCORP1Q8N888 145 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 ADAMTS18Q8TE60 1221 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 RNF31Q96EP0 1072 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 SCARF2Q96GP6 870 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 FAM84AQ96KN4 292 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 WDR77Q9BQA1 342 aaPredicted RBP10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 MED10Q9BTT4 135 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 POLDIP3Q9BY77 421 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 STMN3Q9NZ72 180 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 ZNHIT2Q9UHR6 403 aa10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 AGO2Q9UKV8 859 aaKnown RBP10.77□□□□□ -0.69
HDGFL3-204ENST00000563790 EPPK1P58107 5090 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 KPNA3O00505 521 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 CTAG2O75638 210 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 CTSLP07711 333 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 CD19P15391 556 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 KCNAB1Q14722 419 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 FSCBQ5H9T9 825 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 EARS2Q5JPH6 523 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 B3GNTL1Q67FW5 361 aaPredicted RBP10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 CHSY3Q70JA7 882 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 FUKQ8N0W3 1084 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 COG1Q8WTW3 980 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 LARP4BQ92615 738 aaKnown RBP10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 KCNB2Q92953 911 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 DPEP2Q9H4A9 486 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 SERTAD1Q9UHV2 236 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 SH3BGRL2Q9UJC5 107 aa10.76□□□□□ -0.69
HDGFL3-204ENST00000563790 IGLON5A6NGN9 336 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 A8MU76 341 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 CREB3O43889 395 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 KLHL41O60662 606 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 IPO13O94829 963 aaKnown RBP10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 MT-ND3P03897 115 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 ESRRAP11474 423 aaPredicted RBP10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 CPA1P15085 419 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 PEX5P50542 639 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 NDST1P52848 882 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 MAP3K7CLP57077 242 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 CBLBQ13191 982 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 NNTQ13423 1086 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 MYBPC3Q14896 1274 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 KYNUQ16719 465 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 RFWD3Q6PCD5 774 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 PAMR1Q6UXH9 720 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 CCDC186Q7Z3E2 898 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 TAF8Q7Z7C8 310 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 ARFGAP1Q8N6T3 406 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 KIAA1524Q8TCG1 905 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 AGXT2Q9BYV1 514 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 ZNF552Q9H707 407 aaPredicted RBP10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 GPAMQ9HCL2 828 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 DYRK4Q9NR20 520 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 PLEKHM1Q9Y4G2 1056 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 CSAG2Q9Y5P2 127 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 STYXL1Q9Y6J8 313 aa10.75□□□□□ -0.69
HDGFL3-204ENST00000563790 A8MXQ7 604 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 HHLA1C9JL84 531 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 IRAK2O43187 625 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 ATP9BO43861 1147 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 SLCO2B1O94956 709 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 NDUFA10O95299 355 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 SCP2P22307 547 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 SRP54P61011 504 aaKnown RBP10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 RPS15P62841 145 aaKnown RBP10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 GPLD1P80108 840 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 CDC16Q13042 620 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 CDH18Q13634 790 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 SNAP47Q5SQN1 464 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 HAUS3Q68CZ6 603 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 Q6ZVU0 165 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 SKAP1Q86WV1 359 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 APCDD1Q8J025 514 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 TMIEQ8NEW7 156 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 PPP4R1Q8TF05 950 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 TRIM56Q9BRZ2 755 aaKnown RBP10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 MTMR12Q9C0I1 747 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 ZBTB20Q9HC78 741 aaPredicted RBP10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 NPDC1Q9NQX5 325 aaPredicted RBP10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 ARHGEF38Q9NXL2 777 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 STIM2Q9P246 746 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 KCNJ14Q9UNX9 436 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 FADS3Q9Y5Q0 445 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 DNAJC13O75165 2243 aa10.74□□□□□ -0.69
HDGFL3-204ENST00000563790 ANKRD63C9JTQ0 380 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 SMAD7O15105 426 aaKnown RBP10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 AP1G1O43747 822 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 RAF1P04049 648 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 MSX1P28360 303 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 CA5AP35218 305 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 CASP6P55212 293 aa10.73□□□□□ -0.69
HDGFL3-204ENST00000563790 NKX6-1P78426 367 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms