RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FOXO6A8MYZ6 492 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 HEXIM1O94992 359 aaKnown RBP5.28□□□□□ -1.56
LINC00254-201ENST00000563416 NDUFB8O95169 186 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 WNT1P04628 370 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 MCM2P49736 904 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 PNLIPRP1P54315 467 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 PMPCAQ10713 525 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 PPFIA1Q13136 1202 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 HNRNPA0Q13151 305 aaKnown RBP5.28□□□□□ -1.56
LINC00254-201ENST00000563416 PRTGQ2VWP7 1150 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 ALG10Q5BKT4 473 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 ALG10BQ5I7T1 473 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 HYIQ5T013 277 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 ATF7IPQ6VMQ6 1270 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 KRBA2Q6ZNG9 492 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 MYCT1Q8N699 235 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 OR6Y1Q8NGX8 325 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 SLC25A28Q96A46 364 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 EME1Q96AY2 570 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 SAYSD1Q9NPB0 183 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 POLLQ9UGP5 575 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 DTX4Q9Y2E6 619 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 PCDHGB3Q9Y5G1 929 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 LRRFIP2Q9Y608 721 aaKnown RBP5.28□□□□□ -1.56
LINC00254-201ENST00000563416 MED23Q9ULK4 1368 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 ZNF541Q9H0D2 1346 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 A0A0G2JK05 382 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TMEM272A0A1B0GTI8 110 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 ANKRD18BA2A2Z9 1011 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 IPO8O15397 1037 aaKnown RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 SEPT4O43236 478 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 PPIP5K2O43314 1243 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 EPB41L2O43491 1005 aaKnown RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 CCNT1O60563 726 aaKnown RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 EPN2O95208 641 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 HOXB9P17482 250 aaPredicted RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 KCNJ4P48050 445 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 ALKBH1Q13686 389 aaKnown RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 LEXMQ3ZCV2 418 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 ARL13AQ5H913 290 aaPredicted RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 DAB2IPQ5VWQ8 1189 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 LVRNQ6Q4G3 990 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 RTL10Q7L3V2 364 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 RRAGAQ7L523 313 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 IGFN1Q86VF2 1251 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TMEM200AQ86VY9 491 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TMTC2Q8N394 836 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 ANKRD44Q8N8A2 993 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TBC1D16Q8TBP0 767 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TRAPPC12Q8WVT3 735 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 LPAR1Q92633 364 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TAF1DQ9H5J8 278 aaPredicted RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 BICC1Q9H694 974 aaKnown RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 SEPSECSQ9HD40 501 aaKnown RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 ZBTB40Q9NUA8 1239 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 ARL15Q9NXU5 204 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 FBXO2Q9UK22 296 aaPredicted RBP5.27□□□□□ -1.57
LINC00254-201ENST00000563416 TNNQ9UQP3 1299 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 GPR52Q9Y2T5 361 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 PKP3Q9Y446 797 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 RPS6KL1Q9Y6S9 549 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 AK9Q5TCS8 1911 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 PAPPA2Q9BXP8 1791 aa5.27□□□□□ -1.57
LINC00254-201ENST00000563416 THSD7BQ9C0I4 1608 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 OTOFQ9HC10 1997 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 A0A1W2PPC1 479 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 CD8B2A6NJW9 211 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 YDJCA8MPS7 323 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 H0Y3Z8 333 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 DDNO94850 711 aaPredicted RBP5.26□□□□□ -1.57
LINC00254-201ENST00000563416 UFL1O94874 794 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 HLA-DQA2P01906 255 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 CRYABP02511 175 aaKnown RBP5.26□□□□□ -1.57
LINC00254-201ENST00000563416 CHRNB1P11230 501 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 VEGFAP15692 232 aaPredicted RBP5.26□□□□□ -1.57
LINC00254-201ENST00000563416 GSTM2P28161 218 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 CST5P28325 142 aaPredicted RBP5.26□□□□□ -1.57
LINC00254-201ENST00000563416 MAPK9P45984 424 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 CDK18Q07002 472 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 PRKG1Q13976 671 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 TIGD6Q17RP2 521 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 CCDC57Q2TAC2 916 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 FAM185AQ8N0U4 392 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 GPC2Q8N158 579 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 TMEM199Q8N511 208 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 PTGR2Q8N8N7 351 aaPredicted RBP5.26□□□□□ -1.57
LINC00254-201ENST00000563416 FSIP1Q8NA03 581 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 NAXEQ8NCW5 288 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 GOLGA1Q92805 767 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 KAT2AQ92830 837 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 ARRDC3Q96B67 414 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 PPM1MQ96MI6 270 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 EYA3Q99504 573 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 MPHOSPH8Q99549 860 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 MEIS3Q99687 375 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 TRIM31Q9BZY9 425 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 ANKRD2Q9GZV1 360 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 GRHPRQ9UBQ7 328 aa5.26□□□□□ -1.57
LINC00254-201ENST00000563416 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.26□□□□□ -1.57
LINC00254-201ENST00000563416 GJD2Q9UKL4 321 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms