RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ETNPPLQ8TBG4 499 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CREB3L4Q8TEY5 395 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 USP6NLQ92738 828 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF333Q96JL9 665 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 NUF2Q9BZD4 464 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 B3GNT4Q9C0J1 378 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 CCDC68Q9H2F9 335 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 KLHL31Q9H511 634 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 IL1RAPL1Q9NZN1 696 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 KCND2Q9NZV8 630 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF580Q9UK33 172 aa3.43□□□□□ -1.86
SHCBP1-202ENST00000563219 TDRD9Q8NDG6 1382 aaKnown RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM272A0A1B0GTI8 110 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 FAM237BA0A1B0GVD1 139 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 PABPN1LA6NDY0 278 aaKnown RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CBY3A6NI87 242 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CCER2I3L3R5 266 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 HSPB6O14558 160 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 ZC3H11AO75152 810 aaKnown RBP eCLIP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TACC1O75410 805 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM63AO94886 807 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 SCGB1D1O95968 90 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 IL1AP01583 271 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 DNTTP04053 509 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CBSLP0DN79 551 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 RARGP13631 454 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 PORP16435 677 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 EDN2P20800 178 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 ABCD1P33897 745 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CBSP35520 551 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 ARL1P40616 181 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 GPR12P47775 334 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 RARSP54136 660 aaKnown RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 ARSFP54793 590 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 NLRP5P59047 1200 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CREB5Q02930 508 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 SLC18A2Q05940 514 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM115Q12893 351 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 NCAPH2Q6IBW4 605 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TTI2Q6NXR4 508 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM71Q6P5X7 295 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 INO80CQ6PI98 192 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 PARM1Q6UWI2 310 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 FAM83HQ6ZRV2 1179 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 MOB3CQ70IA8 216 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TRAPPC11Q7Z392 1133 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CAMK1DQ8IU85 385 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 FAM217AQ8IXS0 508 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 FRMD1Q8N878 549 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 LRRC57Q8N9N7 239 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 MCPH1Q8NEM0 835 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 DNAAF1Q8NEP3 725 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 NOC3LQ8WTT2 800 aaKnown RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 UBE2Q2Q8WVN8 375 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 KLHL29Q96CT2 875 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CALML4Q96GE6 196 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 WDFY2Q96P53 400 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TREX2Q9BQ50 279 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 WDR77Q9BQA1 342 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 AP1M1Q9BXS5 423 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 NSMCE4AQ9NXX6 385 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 TBC1D14Q9P2M4 693 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 PLEKHB1Q9UF11 243 aaPredicted RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 LIMA1Q9UHB6 759 aaKnown RBP3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 CDH22Q9UJ99 828 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 RAP2CQ9Y3L5 183 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 RAI2Q9Y5P3 530 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 KCNE2Q9Y6J6 123 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 RUSC2Q8N2Y8 1516 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 ADGRF5Q8IZF2 1346 aa3.42□□□□□ -1.86
SHCBP1-202ENST00000563219 A0A096LPK6 155 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 A0A1W2PQM1 296 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 ARHGAP10A1A4S6 786 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 FAM90A10PA6NDY2 464 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 DDTLA6NHG4 134 aaPredicted RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 EBAG9O00559 213 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 VILLO15195 856 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 SEC31AO94979 1220 aaKnown RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 MMP3P08254 477 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CLTBP09497 229 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 ENO3P13929 434 aaPredicted RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 COX7A2P14406 83 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CHRNB2P17787 502 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 GCH1P30793 250 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 EFNA5P52803 228 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 PSMC6P62333 389 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CYP4A11Q02928 519 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CEBPZQ03701 1054 aaKnown RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 LRMPQ12912 555 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CHAF1BQ13112 559 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 FRG1Q14331 258 aaKnown RBP3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 DUSP6Q16828 381 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 SPECC1Q5M775 1068 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 NUGGCQ68CJ6 796 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM81Q6P7N7 255 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 CYP20A1Q6UW02 462 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 TAGAPQ8N103 731 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 ADSSL1Q8N142 457 aa3.41□□□□□ -1.86
SHCBP1-202ENST00000563219 WDTC1Q8N5D0 677 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms