RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 TBC1D14Q9P2M4 693 aa4.81□□□□□ -1.64
CHD9-206ENST00000562791 CIDEBQ9UHD4 219 aa4.81□□□□□ -1.64
CHD9-206ENST00000562791 ZNF148Q9UQR1 794 aa4.81□□□□□ -1.64
CHD9-206ENST00000562791 TRAF3IP3Q9Y228 551 aa4.81□□□□□ -1.64
CHD9-206ENST00000562791 TNFSF13BQ9Y275 285 aa4.81□□□□□ -1.64
CHD9-206ENST00000562791 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.81□□□□□ -1.643e-13■■□□□ 14.2
CHD9-206ENST00000562791 BAZ1AQ9NRL2 1556 aaPredicted RBP4.81□□□□□ -1.64
CHD9-206ENST00000562791 MAPK8IP3Q9UPT6 1336 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 CCDC162PA2VCL2 907 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 BECN2A8MW95 431 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 KCNJ18B7U540 433 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 PRSS44E7EML9 344 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 BAIAP3O94812 1187 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 CYP1A2P05177 515 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 HSPA1LP34931 641 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 RFX5P48382 616 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 RRP1P56182 461 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 POLE2P56282 527 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 UBASH3AP57075 661 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 ZBTB16Q05516 673 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 RNASELQ05823 741 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 SF3A3Q12874 501 aaKnown RBP eCLIP4.8□□□□□ -1.64
CHD9-206ENST00000562791 MRPL28Q13084 256 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 Q5PR19 223 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 CAPRIN2Q6IMN6 1127 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 TMEM88Q6PEY1 159 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 NANOGNBQ7Z5D8 188 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 SPATA2LQ8IUW3 424 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 GALNT15Q8N3T1 639 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 CARNMT1Q8N4J0 409 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 SYT2Q8N9I0 419 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 TNIP2Q8NFZ5 429 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 LILRB1Q8NHL6 650 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 KIAA1524Q8TCG1 905 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 WDR60Q8WVS4 1066 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 CDKL2Q92772 493 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 ZKSCAN4Q969J2 545 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 CFAP36Q96G28 342 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 CGREF1Q99674 301 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 JPH2Q9BR39 696 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 NTPCRQ9BSD7 190 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 SF3B5Q9BWJ5 86 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 SORBS1Q9BX66 1292 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 TTC12Q9H892 705 aaPredicted RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 ZWILCHQ9H900 591 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 PARVGQ9HBI0 331 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 PLAC1Q9HBJ0 212 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 ZNF69Q9UC07 566 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 TMCO1Q9UM00 188 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 MRPL11Q9Y3B7 192 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 DAAM1Q9Y4D1 1078 aa4.8□□□□□ -1.64
CHD9-206ENST00000562791 COPG1Q9Y678 874 aaKnown RBP4.8□□□□□ -1.64
CHD9-206ENST00000562791 PLEKHH1Q9ULM0 1364 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 GAKO14976 1311 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM90A18PA6NE21 464 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM90A16PA6NEW6 464 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM90A9PA6NNJ1 464 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM90A5PA8MXJ8 464 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 INAFM1C9JVW0 142 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 NDUFAB1O14561 156 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 TSPAN1O60635 241 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 ZNF254O75437 659 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 TNFRSF6BO95407 300 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM90A15PP0C7V4 464 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM90A14PP0C7W9 464 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 PNMA6AP0CW24 399 aaPredicted RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 CCDC166P0CW27 439 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 SFTPCP11686 197 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 GNL1P36915 607 aaPredicted RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 ADPRHP54922 357 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 RHAGQ02094 409 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 LTBQ06643 244 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 DMPKQ09013 629 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 DPYSQ14117 519 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 SMC1AQ14683 1233 aaKnown RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 ASIC2Q16515 512 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 INO80DQ53TQ3 878 aaPredicted RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 ALG10Q5BKT4 473 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 FAM133BQ5BKY9 247 aaKnown RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 ALG10BQ5I7T1 473 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 SPATA1Q5VX52 437 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 KIAA1324Q6UXG2 1013 aaKnown RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 Q6ZTK2 550 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 NCCRP1Q6ZVX7 275 aaPredicted RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 HOOK3Q86VS8 718 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 DCP1BQ8IZD4 617 aaKnown RBP4.79□□□□□ -1.64
CHD9-206ENST00000562791 LRRC43Q8N309 656 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 IQCF1Q8N6M8 205 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 PRR26Q8N8Z3 221 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 TEX19Q8NA77 164 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 CCDC112Q8NEF3 446 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 ENGASEQ8NFI3 743 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 OR1N1Q8NGS0 311 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 STYXQ8WUJ0 223 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 HVCN1Q96D96 273 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 SPDL1Q96EA4 605 aa4.79□□□□□ -1.64
CHD9-206ENST00000562791 TP63Q9H3D4 680 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms