RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TP53BP1Q12888 1972 aaPredicted RBP3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 C17orf113A0A1B0GUU1 675 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 PER2O15055 1255 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CEP104O60308 925 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CKMT1AP12532 417 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CD72P21854 359 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 PSMC2P35998 433 aaKnown RBP3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CENPAP49450 140 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 KRTAP10-3P60369 221 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CHRNDQ07001 517 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 NAA25Q14CX7 972 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 EDRF1Q3B7T1 1238 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CYP26C1Q6V0L0 522 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 ADGRG6Q86SQ4 1221 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 EXOC3L1Q86VI1 746 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CHD1LQ86WJ1 897 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 ZNF354CQ86Y25 554 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 DCUN1D3Q8IWE4 304 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 CPXM2Q8N436 756 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 TCP11L2Q8N4U5 519 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 LSM14AQ8ND56 463 aaKnown RBP3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 MYRIPQ8NFW9 859 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 RASSF8Q8NHQ8 419 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 TMEM170AQ8WVE7 144 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 ADAMTS14Q8WXS8 1223 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 OTULINQ96BN8 352 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 RNF183Q96D59 192 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 UBXN10Q96LJ8 280 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 LMAN2LQ9H0V9 348 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 WDR6Q9NNW5 1121 aaKnown RBP3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 LUZP4Q9P127 313 aa3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 COL2A1P02458 1487 aaPredicted RBP3.26□□□□□ -1.89
HDGFL3-202ENST00000562702 ARHGAP10A1A4S6 786 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 EBAG9O00559 213 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 ITM2AO43736 263 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 SLC25A17O43808 307 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 NAGAP17050 411 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 CTPS1P17812 591 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 ANOS1P23352 680 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 MYF6P23409 242 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 DCTDP32321 178 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 PGM1P36871 562 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 THPOP40225 353 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 RFX5P48382 616 aaPredicted RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 NUDT6P53370 316 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 PMS2P54278 862 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 ERVK11-1P61568 191 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 YWHAZP63104 245 aaKnown RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 TLE2Q04725 743 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 SLC18A2Q05940 514 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 FAM27E3Q08E93 113 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 ZNF284Q2VY69 593 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 FBXO43Q4G163 708 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 PLEKHO1Q53GL0 409 aaPredicted RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 DCAF6Q58WW2 860 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 NAA35Q5VZE5 725 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 RETSATQ6NUM9 610 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 MEX3BQ6ZN04 569 aaKnown RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 LRRC8DQ7L1W4 858 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 PRSS45Q7RTY3 260 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 DENND6AQ8IWF6 608 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 SMC5Q8IY18 1101 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 MIGA1Q8NAN2 632 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 MCPH1Q8NEM0 835 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 TNIP2Q8NFZ5 429 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 GDPD5Q8WTR4 605 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 USP13Q92995 863 aaPredicted RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 EYA3Q99504 573 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 CLSTN3Q9BQT9 956 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 NPFFR1Q9GZQ6 430 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 MVB12BQ9H7P6 319 aa3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 SPATS2LQ9NUQ6 558 aaKnown RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 CNOT7Q9UIV1 285 aaKnown RBP3.25□□□□□ -1.89
HDGFL3-202ENST00000562702 KIF21AQ7Z4S6 1674 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 IGKV3D-20A0A0C4DH25 116 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 GOLGA6L10A0A0M3HER8 536 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 KDM4EB2RXH2 506 aaPredicted RBP3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 CHL1O00533 1208 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 KCNJ13O60928 360 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 SOX30O94993 753 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 IFIT1P09914 478 aaKnown RBP3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 RNF224P0DH78 156 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 AMTP48728 403 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 CCR5P51681 352 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 VAMP2P63027 116 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 TUBA1BP68363 451 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 ST3GAL1Q11201 340 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 CAPSQ13938 189 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 HNF4GQ14541 408 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 PLEKHA7Q6IQ23 1121 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 MON1AQ86VX9 555 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 CPOQ8IVL8 374 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 SMAP1Q8IYB5 467 aaPredicted RBP3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 TMED6Q8WW62 240 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 UHRF2Q96PU4 802 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 FIZ1Q96SL8 496 aa3.24□□□□□ -1.89
HDGFL3-202ENST00000562702 PHF7Q9BWX1 381 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms