RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 A0A087X0M5 115 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 A0A1B0GX30 115 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 A0A1W2PPH5 198 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 OR6C68A6NDL8 312 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 KCNJ18B7U540 433 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 F5H0A9 414 aaPredicted RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 RRHO14718 337 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 TMEM63AO94886 807 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CELF2O95319 508 aaKnown RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 CBX6O95503 412 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 PRR35P0CG20 571 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CAPN2P17655 700 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CERS1P27544 350 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 ABCD3P28288 659 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 TYK2P29597 1187 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 AVPR2P30518 371 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 IDUAP35475 653 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 GGT5P36269 586 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 EPS15P42566 896 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 SOX2P48431 317 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 KLF9Q13886 244 aaPredicted RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 PDE1CQ14123 709 aaPredicted RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 IL13RA2Q14627 380 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 MTX3Q5HYI7 312 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 SLC9C2Q5TAH2 1124 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 ZNF626Q68DY1 528 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 RGMBQ6NW40 437 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 ATF7IPQ6VMQ6 1270 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CTU1Q7Z7A3 348 aaKnown RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 CNGA4Q8IV77 575 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 ADGRF4Q8IZF3 695 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 DNAAF1Q8NEP3 725 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 HSPH1Q92598 858 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CUL5Q93034 780 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 ZBTB10Q96DT7 871 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CFAP53Q96M91 514 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 TEFMQ96QE5 360 aaKnown RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 FRG2BQ96QU4 278 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 ZNF347Q96SE7 839 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 AGXT2Q9BYV1 514 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 PNNQ9H307 717 aaKnown RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 EPHX3Q9H6B9 360 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 TXNRD2Q9NNW7 524 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 KRT84Q9NSB2 600 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 TMEM248Q9NWD8 314 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 TAS2R10Q9NYW0 307 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 IL1RAPL1Q9NZN1 696 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 AASSQ9UDR5 926 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 CNPY2Q9Y2B0 182 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 FNDC1Q4ZHG4 1894 aaPredicted RBP3.98□□□□□ -1.77
HERC1-215ENST00000561436 DOT1LQ8TEK3 1739 aa3.98□□□□□ -1.77
HERC1-215ENST00000561436 SNED1Q8TER0 1413 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 FAM90A7PA6NKC0 464 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 C16orf96A6NNT2 1141 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 FAM90A22PA8MWA6 464 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 FAM90A12PA8MX19 464 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 FAM90A23PA8MXZ1 464 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TEX22C9J3V5 150 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 F8W810 466 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 PER2O15055 1255 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 SPTLC2O15270 562 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TP73O15350 636 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 PPIP5K2O43314 1243 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 DDX58O95786 925 aaKnown RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 LATS1O95835 1130 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 F9P00740 461 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 IL1AP01583 271 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 COX7A2P14406 83 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 CIITAP33076 1130 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 RXRGP48443 463 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 CCR9P51686 369 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 YPEL5P62699 121 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 GHRHRQ02643 423 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 CXCL9Q07325 125 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 NEXNQ0ZGT2 675 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TDGQ13569 410 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 SIM2Q14190 667 aaPredicted RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 TAF7Q15545 349 aaPredicted RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 SLC9C1Q4G0N8 1177 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 HSP90AB3PQ58FF7 597 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ALG10Q5BKT4 473 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ZNF766Q5HY98 468 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ALG10BQ5I7T1 473 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 VWA5B1Q5TIE3 1220 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TTLL5Q6EMB2 1281 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ISM2Q6H9L7 571 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 KIF6Q6ZMV9 814 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 RTL10Q7L3V2 364 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 RNF144BQ7Z419 303 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 R3HCC1LQ7Z5L2 792 aaKnown RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 TFAP2DQ7Z6R9 452 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 CPLX4Q7Z7G2 160 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 FAM185AQ8N0U4 392 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 SCAIQ8N9R8 606 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 TDRD7Q8NHU6 1098 aaKnown RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 FAM110DQ8TAY7 271 aaPredicted RBP3.97□□□□□ -1.77
HERC1-215ENST00000561436 ZNF398Q8TD17 642 aa3.97□□□□□ -1.77
HERC1-215ENST00000561436 ADAMTS15Q8TE58 950 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms