RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PDE1CQ14123 709 aaPredicted RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 TCEA2Q15560 299 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 CPSF6Q16630 551 aaKnown RBP eCLIP5.43□□□□□ -1.54
HERC1-213ENST00000561359 TMEM119Q4V9L6 283 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 PITRM1Q5JRX3 1037 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 MPP7Q5T2T1 576 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 L1TD1Q5T7N2 865 aaKnown RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 ATP1A1-AS1Q5TC04 95 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 PIK3R6Q5UE93 754 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 NEK5Q6P3R8 708 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 KYAT3Q6YP21 454 aaKnown RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 MMS22LQ6ZRQ5 1243 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 CLEC20AQ6ZU45 233 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 ZAR1Q86SH2 424 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 SFR1Q86XK3 245 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 CBWD2Q8IUF1 395 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 WDR49Q8IV35 697 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 GPD1LQ8N335 351 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 ARHGAP18Q8N392 663 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 CARNMT1Q8N4J0 409 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 ARL10Q8N8L6 244 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 C12orf29Q8N999 325 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 FIBINQ8TAL6 211 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 STARD8Q92502 1023 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 SYAP1Q96A49 352 aaPredicted RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 FAM131CQ96AQ9 280 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 BMFQ96LC9 184 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 LURAP1Q96LR2 239 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 TAAR9Q96RI9 348 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 EFHD1Q9BUP0 239 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 SLC13A1Q9BZW2 595 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 FOXP1Q9H334 677 aaPredicted RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 TCEAL2Q9H3H9 227 aaPredicted RBP5.43□□□□□ -1.54
HERC1-213ENST00000561359 SEMA6CQ9H3T2 930 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 TBC1D7Q9P0N9 293 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 KCND3Q9UK17 655 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 KCTD3Q9Y597 815 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 HS3ST3A1Q9Y663 406 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 ITIH6Q6UXX5 1313 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 DCHS2Q6V1P9 2916 aa5.43□□□□□ -1.54
HERC1-213ENST00000561359 STX6O43752 255 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 RFPL1O75677 317 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 GCNT3O95395 438 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 NADKO95544 446 aaPredicted RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 PAK4O96013 591 aaPredicted RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 FOSL1P15407 271 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 TSHRP16473 764 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 TRIM21P19474 475 aaKnown RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 PDCP20941 246 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 ADMP35318 185 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 NUMBP49757 651 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 GP2P55259 537 aaKnown RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 YWHAGP61981 247 aaKnown RBP eCLIP5.42□□□□□ -1.54
HERC1-213ENST00000561359 ID3Q02535 119 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 EIF2B5Q13144 721 aaKnown RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 PTK2BQ14289 1009 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 C16orf72Q14CZ0 275 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 INPP5JQ15735 1006 aaPredicted RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 ZNF699Q32M78 642 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 MAP9Q49MG5 647 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 ACCSLQ4AC99 568 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 NADK2Q4G0N4 442 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 PRR30Q53SZ7 412 aaPredicted RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 ZRANB3Q5FWF4 1079 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 FAXCQ5TGI0 409 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 SEL1L3Q68CR1 1132 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 SPNS3Q6ZMD2 512 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 KDELC2Q7Z4H8 507 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 GDF7Q7Z4P5 450 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 SULF2Q8IWU5 870 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 PHACTR4Q8IZ21 702 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 UNC5BQ8IZJ1 945 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 SHISA5Q8N114 240 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 HJURPQ8NCD3 748 aaPredicted RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 CCDC112Q8NEF3 446 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 OR6C4Q8NGE1 309 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 RASSF8Q8NHQ8 419 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 PCDH19Q8TAB3 1148 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 FBF1Q8TES7 1133 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 ART4Q93070 314 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 CCDC127Q96BQ5 260 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 WDR89Q96FK6 387 aaPredicted RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 CALML4Q96GE6 196 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 C8orf76Q96K31 380 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 LMLNQ96KR4 655 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 LRRC61Q9BV99 259 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 TM6SF1Q9BZW5 370 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 ACSS3Q9H6R3 686 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 CBX8Q9HC52 389 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 PNPLA8Q9NP80 782 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 DYRK4Q9NR20 520 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 GPR27Q9NS67 375 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 RRN3Q9NYV6 651 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 SFMBT1Q9UHJ3 866 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 TLK1Q9UKI8 766 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 GPR34Q9UPC5 381 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 ZFR2Q9UPR6 939 aaKnown RBP5.42□□□□□ -1.54
HERC1-213ENST00000561359 NAALADL1Q9UQQ1 740 aa5.42□□□□□ -1.54
HERC1-213ENST00000561359 HBS1LQ9Y450 684 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms