RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PSKH2Q96QS6 385 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 SEMA3CQ99985 751 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 CPEB1Q9BZB8 566 aaKnown RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 NOD2Q9HC29 1040 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 TM7SF3Q9NS93 570 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 DTLQ9NZJ0 730 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 GUCA1BQ9UMX6 200 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 PACSIN2Q9UNF0 486 aaPredicted RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 ZFR2Q9UPR6 939 aaKnown RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 FNDC3AQ9Y2H6 1198 aaKnown RBP10.22□□□□□ -0.77
HERC1-212ENST00000561348 TRPM6Q9BX84 2022 aa10.22□□□□□ -0.77
HERC1-212ENST00000561348 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 KNL1Q8NG31 2342 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 GOLGA6CA6NDK9 693 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 GOLGA6BA6NDN3 693 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 UPK3BL1B0FP48 263 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 UPK3BL2E5RIL1 263 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 TLR4O00206 839 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 GIPC1O14908 333 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 PPP1R12AO14974 1030 aaPredicted RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 TSPAN6O43657 245 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 SH3BP5O60239 455 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 SDC3O75056 442 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 TM7SF2O76062 418 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 WNT1P04628 370 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 GOLGA6DP0CG33 693 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 THEGLP0DJG4 465 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ZFXP17010 805 aaPredicted RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 CTPS1P17812 591 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 HNRNPA2B1P22626 353 aaKnown RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 FECHP22830 423 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 CCNCP24863 283 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 CTNNA2P26232 953 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 EPHB1P54762 984 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 AP1S1P61966 158 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 BNC1Q01954 994 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 DSC2Q02487 901 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ELP6Q0PNE2 266 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 TFDP2Q14188 446 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 TCEAL1Q15170 157 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 UGP2Q16851 508 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ZNF542PQ5EBM4 170 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 LRRC38Q5VT99 294 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 KIAA1161Q6NSJ0 714 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 C11orf63Q6NUN7 778 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 NEK5Q6P3R8 708 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 IL27RAQ6UWB1 636 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 KDM7AQ6ZMT4 941 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ZC3H18Q86VM9 953 aaKnown RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 GATAD2AQ86YP4 633 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 RCOR2Q8IZ40 523 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 PLD5Q8N7P1 536 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 C1orf216Q8TAB5 229 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ANP32BQ92688 251 aaKnown RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 RAB7BQ96AH8 199 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 RBM41Q96IZ5 413 aaKnown RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 ZNF641Q96N77 438 aaPredicted RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 CAMK1GQ96NX5 476 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 AGAP3Q96P47 875 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 TUBGCP5Q96RT8 1024 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ORAI3Q9BRQ5 295 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 ZDHHC5Q9C0B5 715 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 POLR1EQ9GZS1 481 aaKnown RBP10.21□□□□□ -0.77
HERC1-212ENST00000561348 SLC32A1Q9H598 525 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 PCDH12Q9NPG4 1184 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 GDF3Q9NR23 364 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 HAUS2Q9NVX0 235 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 GOLGA6AQ9NYA3 693 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 DLL3Q9NYJ7 618 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 AMFRQ9UKV5 643 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 DMTF1Q9Y222 760 aa10.21□□□□□ -0.77
HERC1-212ENST00000561348 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 GRID2IPA4D2P6 1211 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 C3orf70A6NLC5 250 aaPredicted RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 H7C0C1 242 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 FPGTO14772 594 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 VILLO15195 856 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 MATN3O15232 486 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 RAD51BO15315 384 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 LATO43561 262 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 CPP00450 1065 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 HLA-DQB2P05538 268 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 ITGAVP06756 1048 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 HSPA9P38646 679 aaKnown RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 CETN2P41208 172 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 CDKN2BP42772 138 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 ATP5OP48047 213 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 LIG3P49916 1009 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 LIMK1P53667 647 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 HADHBP55084 474 aaKnown RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 POLR2LP62875 67 aaKnown RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 NSUN2Q08J23 767 aaKnown RBP eCLIP10.2□□□□□ -0.78
HERC1-212ENST00000561348 ZNF211Q13398 564 aaPredicted RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 HNRNPDQ14103 355 aaKnown RBP10.2□□□□□ -0.78
HERC1-212ENST00000561348 ACOX1Q15067 660 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 PDK1Q15118 436 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 TCEA2Q15560 299 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 PCSK7Q16549 785 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 TFDP3Q5H9I0 405 aa10.2□□□□□ -0.78
HERC1-212ENST00000561348 ARMC12Q5T9G4 340 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms