RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	HEPHL1	Q6MZM0	1159 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	TTI2	Q6NXR4	508 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	SYCE2	Q6PIF2	218 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	KLHL24	Q6TFL4	600 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	IKBIP	Q70UQ0	350 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	FASTKD5	Q7L8L6	764 aa	Known RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	NOXA1	Q86UR1	476 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	SRRM1	Q8IYB3	904 aa	Known RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	NANOGP1	Q8N7R0	232 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	TMEM116	Q8NCL8	245 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	MCPH1	Q8NEM0	835 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	GJC3	Q8NFK1	279 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	ZC3HAV1L	Q96H79	300 aa	Known RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	ZFYVE19	Q96K21	471 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	WDFY2	Q96P53	400 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	WDR77	Q9BQA1	342 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	H2AFJ	Q9BTM1	129 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	GHITM	Q9H3K2	345 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	MUC13	Q9H3R2	512 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	POLR1B	Q9H9Y6	1135 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	NCKIPSD	Q9NZQ3	722 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	CARD8	Q9Y2G2	431 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	FAM96B	Q9Y3D0	163 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	SCIN	Q9Y6U3	715 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	TOP2A	P11388	1531 aa	Known RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	TMEM272	A0A1B0GTI8	110 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	EIF3CL	B5ME19	914 aa	Known RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	AP3D1	O14617	1153 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	NDUFB8	O95169	186 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	CCNDBP1	O95273	360 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	TF	P02787	698 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	IRF1	P10914	325 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	ITGAX	P20702	1163 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	PTGER1	P34995	402 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	AVPR1A	P37288	418 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	MMP13	P45452	471 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	ABCG1	P45844	678 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SSBP2	P81877	361 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	FRG1	Q14331	258 aa	Known RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	RBMS2	Q15434	407 aa	Known RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	CCNG2	Q16589	344 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	MEA1	Q16626	185 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	COL28A1	Q2UY09	1125 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	PRAMEF19	Q5SWL8	479 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SPATA1	Q5VX52	437 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	MORN5	Q5VZ52	161 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	ZKSCAN2	Q63HK3	967 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	CPLX2	Q6PUV4	134 aa	Known RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	PIP4P1	Q86T03	277 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	FRMD1	Q8N878	549 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	C16orf52	Q8NHV5	167 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	PSPC1	Q8WXF1	523 aa	Known RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	GTF3C6	Q969F1	213 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SMARCE1	Q969G3	411 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	ZNF333	Q96JL9	665 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	TIGD1	Q96MW7	591 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SIN3A	Q96ST3	1273 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	NPFFR1	Q9GZQ6	430 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SPRTN	Q9H040	489 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	PLEKHA4	Q9H4M7	779 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SLC6A13	Q9NSD5	602 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	HAUS2	Q9NVX0	235 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	ZNF70	Q9UC06	446 aa	Predicted RBP	5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	SLCO3A1	Q9UIG8	710 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	GPR34	Q9UPC5	381 aa		5.66	□□□□□ -1.5
TCF12-223	ENST00000561235	FGD5	Q6ZNL6	1462 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	LIPT2	A6NK58	231 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	MDM4	O15151	490 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	IFNA2	P01563	188 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TFPI	P10646	304 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	RARG	P13631	454 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	ENO3	P13929	434 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	PRF1	P14222	555 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	CHRNB2	P17787	502 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	HADHA	P40939	763 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	NAP1L1	P55209	391 aa	Known RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	CDH12	P55289	794 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	LAMB3	Q13751	1172 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	KLF9	Q13886	244 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	FGFBP1	Q14512	234 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	LPIN1	Q14693	890 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	RABEP1	Q15276	862 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	ODF3L2	Q3SX64	289 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	PLEKHO1	Q53GL0	409 aa	Predicted RBP	5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TSSK4	Q6SA08	328 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	CCDC129	Q6ZRS4	1044 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	SLC16A12	Q6ZSM3	486 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	CAMK1D	Q8IU85	385 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	DENND6A	Q8IWF6	608 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TTC39C	Q8N584	583 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	ENGASE	Q8NFI3	743 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	INPP5D	Q92835	1189 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TMEM18	Q96B42	140 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	MXRA8	Q9BRK3	442 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TRMO	Q9BU70	441 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	TKTL2	Q9H0I9	626 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	CDT1	Q9H211	546 aa		5.65	□□□□□ -1.5
TCF12-223	ENST00000561235	KLHL31	Q9H511	634 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms