RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 CLPBQ9H078 707 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CATSPERBQ9H7T0 1116 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 AP4E1Q9UPM8 1137 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 RAI2Q9Y5P3 530 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 PMS2P1A4D2B8 440 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 LRRC53A6NM62 1247 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 J3KR12 359 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TPP1O14773 563 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TEX33O43247 280 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 PRAMEF11O60813 436 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 C1QL1O75973 258 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TM7SF2O76062 418 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 C6P13671 934 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TIMP2P16035 220 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 FERP16591 822 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 HTR7P34969 479 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 DUSP3P51452 185 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TPI1P60174 286 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 YPEL5P62699 121 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 GABREP78334 506 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TLE3Q04726 772 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 C1orf61Q13536 156 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 AGERQ15109 404 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TMEM52BQ4KMG9 183 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 AFMIDQ63HM1 303 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 KCTD16Q68DU8 428 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 PLEKHA7Q6IQ23 1121 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 EFL1Q7Z2Z2 1120 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 SPACA3Q8IXA5 215 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 ANKRD20A12PQ8NF67 263 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 MAPK15Q8TD08 544 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 BTN2A2Q8WVV5 523 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 FGF11Q92914 225 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 CELF6Q96J87 481 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 FCRL3Q96P31 734 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 UBL7Q96S82 380 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 KCTD15Q96SI1 283 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 CPEB1Q9BZB8 566 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 PCDH12Q9NPG4 1184 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 UBA2Q9UBT2 640 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 ENTPD2Q9Y5L3 495 aa10.25□□□□□ -0.77
SNRPA1-212ENST00000560496 TENM4Q6N022 2769 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ANKRD62A6NC57 917 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 LMO7DNF2Z398 122 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 TOR1BO14657 336 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 RIOK3O14730 519 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 RRP8O43159 456 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 BUB1BO60566 1050 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 USP12O75317 370 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PRB1P04280 392 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PRKCGP05129 697 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 TSHRP16473 764 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 GM2AP17900 193 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ACTN2P35609 894 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 EIF4A3P38919 411 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 NDST2P52849 883 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 THOP1P52888 689 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PCBP4P57723 403 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 SKOR1P84550 965 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 TYRO3Q06418 890 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 RAD51Q06609 339 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ELP6Q0PNE2 266 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 CCDC173Q0VFZ6 552 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 RALGDSQ12967 914 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 MAMLD1Q13495 774 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PTK2BQ14289 1009 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 NR0B2Q15466 257 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ISXQ2M1V0 245 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ALG11Q2TAA5 492 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 WSCD2Q2TBF2 565 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PRRT3Q5FWE3 981 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 C3orf38Q5JPI3 329 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 CCDC183Q5T5S1 534 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 IGF2-ASQ6U949 168 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 CRTC1Q6UUV9 634 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PCSK4Q6UW60 755 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 LRRC69Q6ZNQ3 347 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ARHGAP36Q6ZRI8 547 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 TTC7BQ86TV6 843 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 KYQ8NBH2 561 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 TSEN2Q8NCE0 465 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ECHDC3Q96DC8 303 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PDXPQ96GD0 296 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 PRR11Q96HE9 360 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 NSMCE3Q96MG7 304 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ZNF578Q96N58 590 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 GBP4Q96PP9 640 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 NCAPGQ9BPX3 1015 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 C1QTNF7Q9BXJ2 289 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 SLC39A8Q9C0K1 460 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 POLR1BQ9H9Y6 1135 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 EVA1BQ9NVM1 165 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 TMEM63CQ9P1W3 806 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 SPASTQ9UBP0 616 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 IPO11Q9UI26 975 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 MYO6Q9UM54 1294 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms