RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 BLOC1S5-TXNDC5H3BN57 136 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 PCDH7O60245 1069 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 PLA2G6O60733 806 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 INHBAP08476 426 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 ARSAP15289 507 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 IRX1P78414 480 aaPredicted RBP2.67□□□□□ -1.98
SPG11-222ENST00000560435 SLC18A2Q05940 514 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 DCTN1Q14203 1278 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 RPE65Q16518 533 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 RINLQ6ZS11 566 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 NOTCH2NLQ7Z3S9 236 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 PTGR2Q8N8N7 351 aaPredicted RBP2.67□□□□□ -1.98
SPG11-222ENST00000560435 PLEKHA5Q9HAU0 1116 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 SEPSECSQ9HD40 501 aaKnown RBP2.67□□□□□ -1.98
SPG11-222ENST00000560435 ATP8A2Q9NTI2 1148 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 FAM118AQ9NWS6 357 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 C1RLQ9NZP8 487 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 TCEAL9Q9UHQ7 104 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 CLDN16Q9Y5I7 305 aa2.67□□□□□ -1.98
SPG11-222ENST00000560435 ATXN2Q99700 1313 aaKnown RBP2.67□□□□□ -1.98
SPG11-222ENST00000560435 ZIC3O60481 467 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 NDUFS7O75251 213 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 IL1AP01583 271 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 TTKP33981 857 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 MTNR1AP48039 350 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 EFNB3Q15768 340 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 ME3Q16798 604 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 PPP6R3Q5H9R7 873 aaPredicted RBP2.66□□□□□ -1.98
SPG11-222ENST00000560435 CCNYL2Q5T2Q4 361 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 NFRKBQ6P4R8 1299 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 C14orf80Q86SX3 495 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 P2RY8Q86VZ1 359 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 OTULINQ96BN8 352 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 ZNF689Q96CS4 500 aaPredicted RBP2.66□□□□□ -1.98
SPG11-222ENST00000560435 ZNF583Q96ND8 569 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 YME1L1Q96TA2 773 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 CDK19Q9BWU1 502 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 CSTL1Q9H114 145 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 WDR13Q9H1Z4 485 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 SPATS2LQ9NUQ6 558 aaKnown RBP2.66□□□□□ -1.98
SPG11-222ENST00000560435 HCFC1R1Q9NWW0 138 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 NLKQ9UBE8 527 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 BAG5Q9UL15 447 aa2.66□□□□□ -1.98
SPG11-222ENST00000560435 SOCS6O14544 535 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 S100BP04271 92 aaPredicted RBP2.65□□□□□ -1.99
SPG11-222ENST00000560435 TFPIP10646 304 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 CHN1P15882 459 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 GJC1P36383 396 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 PIGAP37287 484 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 GALNTL6Q49A17 601 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 TCTE1Q5JU00 501 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 PAPPA-AS1Q5QFB9 102 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 ATPAF1Q5TC12 328 aaPredicted RBP2.65□□□□□ -1.99
SPG11-222ENST00000560435 IZUMO3Q5VZ72 239 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 DGAT2L7PQ6IED9 249 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 GFRALQ6UXV0 394 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 ODF3L1Q8IXM7 274 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.65□□□□□ -1.99
SPG11-222ENST00000560435 BBS10Q8TAM1 723 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 HCAR2Q8TDS4 363 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 LRR1Q96L50 414 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 LRRC1Q9BTT6 524 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 CCDC177Q9NQR7 707 aaPredicted RBP2.65□□□□□ -1.99
SPG11-222ENST00000560435 TMLHEQ9NVH6 421 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 THAP1Q9NVV9 213 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 RALYQ9UKM9 306 aaKnown RBP2.65□□□□□ -1.99
SPG11-222ENST00000560435 CDC14AQ9UNH5 594 aa2.65□□□□□ -1.99
SPG11-222ENST00000560435 NR5A2O00482 541 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 DVL1O14640 695 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 PLRG1O43660 514 aaKnown RBP2.64□□□□□ -1.99
SPG11-222ENST00000560435 DHX16O60231 1041 aaKnown RBP2.64□□□□□ -1.99
SPG11-222ENST00000560435 IGLV1-44P01699 117 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 CYP21A2P08686 494 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 CLK1P49759 484 aaKnown RBP2.64□□□□□ -1.99
SPG11-222ENST00000560435 DVL1P1P54792 670 aaPredicted RBP2.64□□□□□ -1.99
SPG11-222ENST00000560435 GNB1P62873 340 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 TTC22Q5TAA0 569 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 RAB11FIP2Q7L804 512 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 TMEM219Q86XT9 240 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 KMT5CQ86Y97 462 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 FAM222BQ8WU58 562 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 JDP2Q8WYK2 163 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 CPT1BQ92523 772 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 MUL1Q969V5 352 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 RIPOR3Q96MK2 946 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 RTKNQ9BST9 563 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 BRD8Q9H0E9 1235 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 PDZD7Q9H5P4 517 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 RPS10P5Q9NQ39 176 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 CYSLTR2Q9NS75 346 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 DAPP1Q9UN19 280 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 C19orf53Q9UNZ5 99 aaPredicted RBP2.64□□□□□ -1.99
SPG11-222ENST00000560435 PCDHGB2Q9Y5G2 931 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 AGRNO00468 2067 aa2.64□□□□□ -1.99
SPG11-222ENST00000560435 A0A0J9YWU9 116 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 RASA4O43374 803 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 SLC25A17O43808 307 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 SERPINC1P01008 464 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 ACP5P13686 325 aa2.63□□□□□ -1.99
SPG11-222ENST00000560435 HNRNPH1P31943 449 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms