RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 ERAP2Q6P179 960 aa18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 POLNQ7Z5Q5 900 aa18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 SRLQ86TD4 932 aa18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 HSPH1Q92598 858 aa18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 XPO4Q9C0E2 1151 aaKnown RBP18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 ATP13A3Q9H7F0 1226 aa18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 IPO11Q9UI26 975 aaKnown RBP18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 NENFQ9UMX5 172 aa18.17■□□□□ 0.5
TNFAIP2-206ENST00000560428 CFAP47Q6ZTR5 3102 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 SCAMP1O15126 338 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 BUB1BO60566 1050 aaPredicted RBP18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 GIMD1P0DJR0 217 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 RARAP10276 462 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 IGFALSP35858 605 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 RGRP47804 291 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 RENBPP51606 427 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 YPEL5P62699 121 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 SLC25A11Q02978 314 aaKnown RBP18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 TRIM14Q14142 442 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 TMCO4Q5TGY1 634 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 TMCO3Q6UWJ1 677 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 ARHGAP36Q6ZRI8 547 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 TP53I13Q8NBR0 393 aaPredicted RBP18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 CSPG4P5Q96PW8 444 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 PSKH2Q96QS6 385 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 WRAP53Q9BUR4 548 aaKnown RBP18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 DUSP23Q9BVJ7 150 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 PCDH12Q9NPG4 1184 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 RCOR3Q9P2K3 495 aaPredicted RBP18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 SEPT3Q9UH03 358 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 CSNK1G3Q9Y6M4 447 aa18.16■□□□□ 0.5
TNFAIP2-206ENST00000560428 MYO1FO00160 1098 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 RIOK3O14730 519 aaKnown RBP18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 CBFA2T2O43439 604 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 ITIH2P19823 946 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 SERPINB6P35237 376 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 MMP12P39900 470 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 THOP1P52888 689 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 AP1S1P61966 158 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 LBRQ14739 615 aaKnown RBP18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 AGERQ15109 404 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 CAMK1DQ8IU85 385 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 CACTIN-AS1Q8N1I8 211 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 PDCD7Q8N8D1 485 aaKnown RBP18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 ZNF548Q8NEK5 533 aaPredicted RBP18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 BTN2A2Q8WVV5 523 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 RFFLQ8WZ73 363 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 ECHDC3Q96DC8 303 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 TBATAQ96M53 351 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 USP29Q9HBJ7 922 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 PCDH18Q9HCL0 1135 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 ATP8A1Q9Y2Q0 1164 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 ANKRD36A6QL64 1941 aa18.15■□□□□ 0.5
TNFAIP2-206ENST00000560428 TDRD6O60522 2096 aaKnown RBP18.14■□□□□ 0.5
TNFAIP2-206ENST00000560428 CFAP69A5D8W1 941 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 FAM149AA5PLN7 773 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 TAF4O00268 1085 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 FFAR2O15552 330 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 CKMT1AP12532 417 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 AMPD1P23109 780 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 DAB2P98082 770 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 E2F1Q01094 437 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 BCL2L1Q07817 233 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 ZNF542PQ5EBM4 170 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 TPRG1LQ5T0D9 272 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 SPECC1LQ69YQ0 1117 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 TXNRD3NBQ6F5E7 133 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 MACC1Q6ZN28 852 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 ZSWIM9Q86XI8 627 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 FAM181AQ8N9Y4 354 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 FAM71BQ8TC56 605 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 SPOCK2Q92563 424 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 BTBD6Q96KE9 485 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 DNAJC7Q99615 494 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 ETNK2Q9NVF9 386 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 EVA1BQ9NVM1 165 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 LCMT1Q9UIC8 334 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 LRRK1Q38SD2 2015 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 CHD6Q8TD26 2715 aa18.14■□□□□ 0.49
TNFAIP2-206ENST00000560428 ANKRD11Q6UB99 2663 aaPredicted RBP18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 TRABD2BA6NFA1 517 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 MUSKO15146 869 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 PEX11BO96011 259 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 C6P13671 934 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 JUPP14923 745 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 JUNDP17535 347 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 EIF4A3P38919 411 aaKnown RBP18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 PEX5P50542 639 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 POLR2LP62875 67 aaKnown RBP18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 SLC10A7Q0GE19 358 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 EIF2B5Q13144 721 aaKnown RBP18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 LRRC14Q15048 493 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 IRF4Q15306 451 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 SLC18A3Q16572 532 aa18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 HADHQ16836 314 aaKnown RBP18.13■□□□□ 0.49
TNFAIP2-206ENST00000560428 HES3Q5TGS1 186 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms