RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 MAFKO60675 156 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 LDOC1O95751 146 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 PRLRP16471 622 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 HNRNPA2B1P22626 353 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 FECHP22830 423 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 SERPINB6P35237 376 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 RGRP47804 291 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 CAMK2BQ13554 666 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 FGL2Q14314 439 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 STAT4Q14765 748 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 PAFAH1B3Q15102 231 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 TMCO4Q5TGY1 634 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 ABI3BPQ7Z7G0 1075 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 TMPRSS12Q86WS5 348 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 SPATS2Q86XZ4 545 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 TSEN2Q8NCE0 465 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 EXOC2Q96KP1 924 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 CNDP2Q96KP4 475 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 ZNF641Q96N77 438 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 C1QTNF2Q9BXJ5 285 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 SLC17A9Q9BYT1 436 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 SUV39H2Q9H5I1 410 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 SEPT3Q9UH03 358 aa15.34■□□□□ 0.05
SNRPA1-210ENST00000560383 APC2O95996 2303 aa15.33■□□□□ 0.05
SNRPA1-210ENST00000560383 MUSKO15146 869 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 SLC31A1O15431 190 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 BUB1BO60566 1050 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 RFPL3O75679 317 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 TIMP2P16035 220 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 AKT2P31751 481 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 ACADVLP49748 655 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 HADHBP55084 474 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 SLC10A7Q0GE19 358 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 ILKQ13418 452 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 MESDQ14696 234 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 PRAMEF14Q5SWL7 426 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 SRLQ86TD4 932 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 TTC7BQ86TV6 843 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 MAP7D3Q8IWC1 876 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 PDCD7Q8N8D1 485 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 KCTD6Q8NC69 237 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 PCDH19Q8TAB3 1148 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 FAM174AQ8TBP5 190 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 SPOCK2Q92563 424 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 LENG8Q96PV6 779 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 PANX2Q96RD6 677 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 CINPQ9BW66 212 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 GPR27Q9NS67 375 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 GPSM3Q9Y4H4 160 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 HS3ST3A1Q9Y663 406 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 ARID1BQ8NFD5 2236 aaPredicted RBP15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 ADAMTS20P59510 1910 aa15.33■□□□□ 0.04
SNRPA1-210ENST00000560383 GOLGA4Q13439 2230 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 ZNF487B1APH4 448 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 PIGNO95427 931 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 CR2P20023 1033 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 HNF1BP35680 557 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 HSPA9P38646 679 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 RENBPP51606 427 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 AP1S1P61966 158 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 LBRQ14739 615 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 NCBP2-AS2Q69YL0 99 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 BRAT1Q6PJG6 821 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 DHRS13Q6UX07 377 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 VSIG1Q86XK7 387 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 EID2Q8N6I1 236 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 DENND6BQ8NEG7 585 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 MDM1Q8TC05 714 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 KLK6Q92876 244 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 FATE1Q969F0 183 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 ECHDC3Q96DC8 303 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 KLF6Q99612 283 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 CALN1Q9BXU9 219 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 GGT7Q9UJ14 662 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 LHX6Q9UPM6 363 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 ITM2BQ9Y287 266 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 CA5BQ9Y2D0 317 aa15.32■□□□□ 0.04
SNRPA1-210ENST00000560383 IGLON5A6NGN9 336 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 PAK4O96013 591 aaPredicted RBP15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 KDELR1P24390 212 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 SLC1A1P43005 524 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 MAGEA1P43355 309 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 GALNT2Q10471 571 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 UGP2Q16851 508 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 TMEM52BQ4KMG9 183 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 GCNT7Q6ZNI0 430 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 CAMK1DQ8IU85 385 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 PQLC3Q8N755 202 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 RAPGEF5Q92565 580 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 IFT43Q96FT9 208 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 KLHDC7BQ96G42 594 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 BMFQ96LC9 184 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 NSMCE3Q96MG7 304 aa15.31■□□□□ 0.04
SNRPA1-210ENST00000560383 MGME1Q9BQP7 344 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms