RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RCOR3Q9P2K3 495 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 COQ6Q9Y2Z9 468 aa11.76□□□□□ -0.53
RABGGTA-216ENST00000560243 A6NNZ2 444 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 MAGEC1O60732 1142 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ITGAVP06756 1048 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 CR2P20023 1033 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 IGFALSP35858 605 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ARRB1P49407 418 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 MAXP61244 160 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 GBE1Q04446 702 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 NSUN2Q08J23 767 aaKnown RBP eCLIP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 SLC10A2Q12908 348 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 PAFAH1B3Q15102 231 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 UGP2Q16851 508 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 TMEM52BQ4KMG9 183 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 FAM182AQ5T1J6 154 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 EID2Q8N6I1 236 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 RFFLQ8WZ73 363 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 CENPTQ96BT3 561 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 FAF2Q96CS3 445 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ECHDC3Q96DC8 303 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ZNF641Q96N77 438 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ZNF599Q96NL3 588 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 LENG8Q96PV6 779 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 TUBGCP5Q96RT8 1024 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 CDC6Q99741 560 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ZNF670Q9BS34 389 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 GOLPH3Q9H4A6 298 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 ATP13A3Q9H7F0 1226 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 NOD2Q9HC29 1040 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 MBNL1Q9NR56 388 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 GPR27Q9NS67 375 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 UCKL1Q9NWZ5 548 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 KLK13Q9UKR3 277 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 HS3ST3A1Q9Y663 406 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 PTPRBP23467 1997 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 WDFY3Q8IZQ1 3526 aa11.75□□□□□ -0.53
RABGGTA-216ENST00000560243 KMT2BQ9UMN6 2715 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 ZZEF1O43149 2961 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 CACNA1BQ00975 2339 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 C3orf70A6NLC5 250 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 TRAFD1O14545 582 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 RIOK3O14730 519 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 TM7SF2O76062 418 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 KRT7P08729 469 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 XPAP23025 273 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 KDELR1P24390 212 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 SERPINA4P29622 427 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 SERPINB6P35237 376 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 MMP12P39900 470 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 BCL2L1Q07817 233 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 GALNT2Q10471 571 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 FZD2Q14332 565 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 ZNF235Q14590 738 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 IHHQ14623 411 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 GRM3Q14832 879 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 PDK2Q15119 407 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 PTPRRQ15256 657 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 CCDC157Q569K6 752 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 ZFYVE27Q5T4F4 411 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 CFAP58Q5T655 872 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 BRAT1Q6PJG6 821 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 RAB44Q7Z6P3 723 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 RHOT2Q8IXI1 618 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 SLC25A45Q8N413 288 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 TP53I13Q8NBR0 393 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 HCAR2Q8TDS4 363 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 CXorf40AQ8TE69 158 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 ASB12Q8WXK4 309 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 MRFAP1L1Q96HT8 127 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 FTSJ1Q9UET6 329 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 KLF15Q9UIH9 416 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 PCDHGC4Q9Y5F7 938 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 FREM2Q5SZK8 3169 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 PLXNB3Q9ULL4 1909 aa11.74□□□□□ -0.53
RABGGTA-216ENST00000560243 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 A8MX80 341 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 TRIM38O00635 465 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 FPGTO14772 594 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 YKT6O15498 198 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 TNFSF14O43557 240 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 LCA5LO95447 670 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 C6P13671 934 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 TNNT1P13805 278 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 DGKAP23743 735 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 ARHGAP25P42331 645 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 MAGEA1P43355 309 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 MMP13P45452 471 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 LIG3P49916 1009 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 KNTC1P50748 2209 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 RENBPP51606 427 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 SUOXP51687 545 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 PFN3P60673 137 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 AP1S1P61966 158 aa11.73□□□□□ -0.53
RABGGTA-216ENST00000560243 ELP6Q0PNE2 266 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms