RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TCAF1Q9Y4C2 921 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 J3KR12 359 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 OR1E1P30953 314 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 TMPRSS15P98073 1019 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 SERINC3Q13530 473 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 FAM78AQ5JUQ0 283 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 KDELC1Q6UW63 502 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 CCDC91Q7Z6B0 441 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 DCLK2Q8N568 766 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 AZIN2Q96A70 460 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 THOC1Q96FV9 657 aaKnown RBP17.97■□□□□ 0.47
SNX1-208ENST00000559844 ARNT2Q9HBZ2 717 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 NT5MQ9NPB1 228 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 GKN1Q9NS71 199 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 TDP1Q9NUW8 608 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 CCL26Q9Y258 94 aa17.97■□□□□ 0.47
SNX1-208ENST00000559844 WNT3AP56704 352 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 ZXDBP98169 803 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 ITKQ08881 620 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 SMAD2Q15796 467 aaKnown RBP17.96■□□□□ 0.47
SNX1-208ENST00000559844 UGP2Q16851 508 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 SPDYAQ5MJ70 313 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 N4BP2L1Q5TBK1 243 aaPredicted RBP17.96■□□□□ 0.47
SNX1-208ENST00000559844 LGI2Q8N0V4 545 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 USP13Q92995 863 aaPredicted RBP17.96■□□□□ 0.47
SNX1-208ENST00000559844 ZFRQ96KR1 1074 aaKnown RBP17.96■□□□□ 0.47
SNX1-208ENST00000559844 ASB16Q96NS5 453 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 LRRC37BQ96QE4 947 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 AGAP2Q99490 1192 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 KLF16Q9BXK1 252 aaPredicted RBP17.96■□□□□ 0.47
SNX1-208ENST00000559844 SNX15Q9NRS6 342 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 ARHGAP26Q9UNA1 814 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 DOCK4Q8N1I0 1966 aa17.96■□□□□ 0.47
SNX1-208ENST00000559844 UNC80Q8N2C7 3258 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 CFAP73A6NFT4 308 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 IRF1P10914 325 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 LAMP2P13473 410 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 SKIV2L2P42285 1042 aaKnown RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 KCNQ1P51787 676 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 SLC10A7Q0GE19 358 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 POU6F1Q14863 301 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 CHI3L2Q15782 390 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 FSTL4Q6MZW2 842 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 ST13P5Q8NFI4 369 aaPredicted RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 SMARCD2Q92925 531 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 ZNF599Q96NL3 588 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 RANBP9Q96S59 729 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 THEGQ9P2T0 379 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 PLIN3O60664 434 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 ATP5HO75947 161 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 SMAD1Q15797 465 aaKnown RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 PUS10Q3MIT2 529 aaKnown RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 CCDC153Q494R4 210 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 RABGAP1LQ5R372 815 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 TMCO4Q5TGY1 634 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 NLRP9Q7RTR0 991 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 CNTN4Q8IWV2 1026 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 MCMBPQ9BTE3 642 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 MECRQ9BV79 373 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 PHF7Q9BWX1 381 aaPredicted RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 ECT2Q9H8V3 914 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 ATP13A1Q9HD20 1204 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 FAM50BQ9Y247 325 aa17.95■□□□□ 0.46
SNX1-208ENST00000559844 MTO1Q9Y2Z2 717 aaKnown RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 ZFP37Q9Y6Q3 630 aaPredicted RBP17.95■□□□□ 0.46
SNX1-208ENST00000559844 HEATR9A2RTY3 570 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 PRAMEF11O60813 436 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 IL9P15248 144 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 VIPR2P41587 438 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 POLD2P49005 469 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 ARFIP2P53365 341 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 CDH4P55283 916 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 BST1Q10588 318 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 OVGP1Q12889 678 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 LBRQ14739 615 aaKnown RBP17.94■□□□□ 0.46
SNX1-208ENST00000559844 PCSK7Q16549 785 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 TTC31Q49AM3 519 aaPredicted RBP17.94■□□□□ 0.46
SNX1-208ENST00000559844 CIR1Q86X95 450 aaPredicted RBP17.94■□□□□ 0.46
SNX1-208ENST00000559844 TDRD5Q8NAT2 981 aaKnown RBP17.94■□□□□ 0.46
SNX1-208ENST00000559844 GABPB2Q8TAK5 448 aaPredicted RBP17.94■□□□□ 0.46
SNX1-208ENST00000559844 SH3RF2Q8TEC5 729 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 VPS39Q96JC1 886 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 MAGEH1Q9H213 219 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 RHOJQ9H4E5 214 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 TXLNGQ9NUQ3 528 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 CFAP97Q9P2B7 532 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 EMCNQ9ULC0 261 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 CHKBQ9Y259 395 aa17.94■□□□□ 0.46
SNX1-208ENST00000559844 LEFTY2O00292 366 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 STC2O76061 302 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 WEE1P30291 646 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 CD86P42081 329 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 CDK18Q07002 472 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 KIAA0930Q6ICG6 404 aaPredicted RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 BBS5Q8N3I7 341 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 CELF5Q8N6W0 485 aaKnown RBP17.93■□□□□ 0.46
SNX1-208ENST00000559844 RFWD2Q8NHY2 731 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 ADAMTS19Q8TE59 1207 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 TADA1Q96BN2 335 aa17.93■□□□□ 0.46
SNX1-208ENST00000559844 ZNF778Q96MU6 729 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms