RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TERF1P54274 439 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 OXCT1P55809 520 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ARF5P84085 180 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 KRTAP1-1Q07627 177 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 FZD2Q14332 565 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 EXOC3L4Q17RC7 722 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 TBC1D25Q3MII6 688 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ZNF542PQ5EBM4 170 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 BRMS1LQ5PSV4 323 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 MANEALQ5VSG8 457 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 C22orf39Q6P5X5 142 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 GBP6Q6ZN66 633 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ERN2Q76MJ5 926 aaKnown RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 TFAP2DQ7Z6R9 452 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 DSG4Q86SJ6 1040 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 SETD3Q86TU7 594 aaPredicted RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 XYLT1Q86Y38 959 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 SPACA3Q8IXA5 215 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 FAM181AQ8N9Y4 354 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 DCAF4L2Q8NA75 395 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ATP11CQ8NB49 1132 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 GRIN3AQ8TCU5 1115 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 FGF11Q92914 225 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 RNF34Q969K3 372 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 PRR11Q96HE9 360 aaPredicted RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 APOLD1Q96LR9 279 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 C1orf74Q96LT6 269 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 FCRL3Q96P31 734 aaPredicted RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 NAA15Q9BXJ9 866 aaKnown RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 HDAC8Q9BY41 377 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 MUC3BQ9H195 1237 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 RBSNQ9H1K0 784 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 TNKS2Q9H2K2 1166 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 C7orf69Q9H7B7 122 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ASCL3Q9NQ33 180 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 DNAJB12Q9NXW2 375 aaKnown RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP3-215ENST00000559771 SLC12A6Q9UHW9 1150 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 GGT7Q9UJ14 662 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 HOOK1Q9UJC3 728 aaKnown RBP5.91□□□□□ -1.46
USP3-215ENST00000559771 FADS3Q9Y5Q0 445 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 AK5Q9Y6K8 562 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 LRP4O75096 1905 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 ASXL3Q9C0F0 2248 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 LRRK1Q38SD2 2015 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 TRPM6Q9BX84 2022 aa5.91□□□□□ -1.46
USP3-215ENST00000559771 SPTY2D1-AS1A0A0U1RR47 76 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 ILVBLA1L0T0 632 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 FAM72CH0Y354 149 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 K7ESM1 405 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 SCAMP1O15126 338 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 MAGEC1O60732 1142 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 PAK4O96013 591 aaPredicted RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 CSF2P04141 144 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 MPOP05164 745 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 RHOCP08134 193 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 ADRB3P13945 408 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 CYP11B1P15538 503 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 ZNF18P17022 549 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 TGM2P21980 687 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 MSNP26038 577 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 L1CAMP32004 1257 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 GKP32189 559 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 ACVRL1P37023 503 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 SCNN1AP37088 669 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 SULT1E1P49888 294 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 SERPINH1P50454 418 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 PDX1P52945 283 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 RNASE9P60153 205 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 KRT83P78385 493 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 E2F1Q01094 437 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 DEUP1Q05D60 604 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 EIF2B5Q13144 721 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 CAMK4Q16566 473 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 SLC25A52Q3SY17 297 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 FAM72AQ5TYM5 149 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 FAM72DQ6L9T8 149 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 KYAT3Q6YP21 454 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 Q6ZSR6 202 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 PARS2Q7L3T8 475 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 TMC6Q7Z403 805 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 NOP9Q86U38 636 aaKnown RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 NLRP14Q86W24 1093 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 FAM72BQ86X60 149 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 TRIM42Q8IWZ5 723 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 AGGF1Q8N302 714 aaeCLIP5.9□□□□□ -1.46
USP3-215ENST00000559771 ZNF843Q8N446 348 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 ZNF548Q8NEK5 533 aaPredicted RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 CCDC97Q96F63 343 aaPredicted RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 IFT43Q96FT9 208 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 FAM81BQ96LP2 452 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 CFAP57Q96MR6 1250 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 C2orf49Q9BVC5 232 aaPredicted RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 CALN1Q9BXU9 219 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 SLC17A9Q9BYT1 436 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 TCEAL2Q9H3H9 227 aaPredicted RBP5.9□□□□□ -1.46
USP3-215ENST00000559771 WDCPQ9H6R7 721 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 NLGN3Q9NZ94 848 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 IL36AQ9UHA7 158 aa5.9□□□□□ -1.46
USP3-215ENST00000559771 ITM2BQ9Y287 266 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms