RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RNGTTO60942 597 aaKnown RBP20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 CES1P23141 567 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 PTPN3P26045 913 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 RBL1P28749 1068 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 EIF3EP60228 445 aaKnown RBP20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 TRAF2Q12933 501 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 UGP2Q16851 508 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 LRRC73Q5JTD7 316 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 PEAR1Q5VY43 1037 aaPredicted RBP20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 NEK5Q6P3R8 708 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 SLC13A5Q86YT5 568 aaPredicted RBP20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 C1orf216Q8TAB5 229 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 SNX19Q92543 992 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 TEKT5Q96M29 485 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 GGT7Q9UJ14 662 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 ZFR2Q9UPR6 939 aaKnown RBP20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 ITM2BQ9Y287 266 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 JRKLQ9Y4A0 524 aa20.47■□□□□ 0.87
TSPAN3-207ENST00000559494 LAMA1P25391 3075 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 CACNA1EQ15878 2313 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 GOLGA6L9A6NEM1 432 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 LATO43561 262 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 PCDH8O95206 1070 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 MMP2P08253 660 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 RBP3P10745 1247 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 BRAT1Q6PJG6 821 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 TRIM69Q86WT6 500 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 TTC13Q8NBP0 860 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 HTR3CQ8WXA8 447 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 HINFPQ9BQA5 517 aa20.46■□□□□ 0.87
TSPAN3-207ENST00000559494 A0A1W2PPC4 97 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 A0A1W2PQU0 124 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 UPK3BL1B0FP48 263 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 PATE3B3GLJ2 98 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 UPK3BL2E5RIL1 263 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 MTSS1O43312 755 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 SOCS5O75159 536 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 PRKCGP05129 697 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 CD27P26842 260 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 MAT2AP31153 395 aaKnown RBP20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 CXCR5P32302 372 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 CD68P34810 354 aaPredicted RBP20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 CFAP58Q5T655 872 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 ADAT2Q7Z6V5 191 aaKnown RBP20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 HORMAD1Q86X24 394 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 SPOCK2Q92563 424 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 KLK6Q92876 244 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 FEM1CQ96JP0 617 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 MIR1-1HGQ9H1L0 117 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 USP29Q9HBJ7 922 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 GLOD4Q9HC38 313 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 PCDH12Q9NPG4 1184 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 VPS45Q9NRW7 570 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 SEMA4GQ9NTN9 838 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 HAUS2Q9NVX0 235 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 RAI2Q9Y5P3 530 aa20.45■□□□□ 0.86
TSPAN3-207ENST00000559494 TSPAN6O43657 245 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 KIF5CO60282 957 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 LRP3O75074 770 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 ZNF806P0C7X5 589 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 XPAP23025 273 aaPredicted RBP20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 DPP6P42658 865 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 SUOXP51687 545 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 SKOR1P84550 965 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 ZNF284Q2VY69 593 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 SEL1L3Q68CR1 1132 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 DARS2Q6PI48 645 aaKnown RBP20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 PRPF39Q86UA1 669 aaKnown RBP20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 ZNF567Q8N184 647 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 PDCD6IPQ8WUM4 868 aaKnown RBP20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC25A51Q9H1U9 297 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 PCDHB9Q9Y5E1 797 aa20.44■□□□□ 0.86
TSPAN3-207ENST00000559494 NEMP1O14524 444 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 RIOK3O14730 519 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 FZD6O60353 706 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 PGLSO95336 258 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 ATP1A1P05023 1023 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 PDHA1P08559 390 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 SERPINF2P08697 491 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 HOXD12P35452 270 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 CD86P42081 329 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 POLR2LP62875 67 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 SEMG2Q02383 582 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 FGL2Q14314 439 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 SF3A2Q15428 464 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 CSRP2Q16527 193 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 DUOXA1Q1HG43 343 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 TMEM52BQ4KMG9 183 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 TMEM259Q4ZIN3 620 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 PID1Q7Z2X4 250 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 CDKL3Q8IVW4 592 aaPredicted RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 ZCCHC9Q8N567 271 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 SLC35B2Q8TB61 432 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 PIH1D2Q8WWB5 315 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 IMP4Q96G21 291 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 RBM15Q96T37 977 aaKnown RBP eCLIP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 VAT1Q99536 393 aa20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 TPX2Q9ULW0 747 aaKnown RBP20.43■□□□□ 0.86
TSPAN3-207ENST00000559494 A0A1W2PQ67 120 aa20.42■□□□□ 0.86
TSPAN3-207ENST00000559494 IGLON5A6NGN9 336 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms