RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 C3orf62Q6ZUJ4 267 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PALM2Q8IXS6 379 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 SYNPOQ8N3V7 929 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 IL17RCQ8NAC3 791 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 MLPHQ9BV36 600 aaPredicted RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 CINPQ9BW66 212 aaPredicted RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 OSBPL6Q9BZF3 934 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PPCSQ9HAB8 311 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 BCCIPQ9P287 314 aaKnown RBP eCLIP16.72■□□□□ 0.27
TPM1-219ENST00000559397 RABGEF1Q9UJ41 708 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 NOVA2Q9UNW9 492 aaKnown RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 STON1Q9Y6Q2 735 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 SMIM23A6NLE4 172 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 F5H423 210 aaPredicted RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 ADAM23O75077 832 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 GSTA2P09210 222 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PRKCHP24723 683 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 GCAP28676 217 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 SLCO1A2P46721 670 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 RGRP47804 291 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 SKOR1P84550 965 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 LRRC32Q14392 662 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 SERPINA13PQ6UXR4 307 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 KDM7AQ6ZMT4 941 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 CHPFQ8IZ52 775 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 RIBC1Q8N443 379 aaPredicted RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 ZNF366Q8N895 744 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PJA1Q8NG27 643 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PTPRN2Q92932 1015 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 FCRL5Q96RD9 977 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 GABRG3Q99928 467 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 MGME1Q9BQP7 344 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 ACSS3Q9H6R3 686 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PLAC1Q9HBJ0 212 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 NT5MQ9NPB1 228 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 TECTAO75443 2155 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PSMD3O43242 534 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 CDH16O75309 829 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 ALADP13716 330 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 HLA-EP13747 358 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 NR1D1P20393 614 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 NTSR1P30989 418 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 MAGOHP61326 146 aaKnown RBP16.71■□□□□ 0.27
TPM1-219ENST00000559397 NSUN2Q08J23 767 aaKnown RBP eCLIP16.71■□□□□ 0.27
TPM1-219ENST00000559397 ZNF235Q14590 738 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 HNRNPA1L2Q32P51 320 aaKnown RBP16.71■□□□□ 0.27
TPM1-219ENST00000559397 ACCSLQ4AC99 568 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 Q6ZS52 159 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 TRMT11Q7Z4G4 463 aaKnown RBP16.71■□□□□ 0.27
TPM1-219ENST00000559397 BBS5Q8N3I7 341 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 PCDH20Q8N6Y1 951 aaKnown RBP16.71■□□□□ 0.27
TPM1-219ENST00000559397 RPLP0P6Q8NHW5 317 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 CLDN23Q96B33 292 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 EBNA1BP2Q99848 306 aaKnown RBP16.71■□□□□ 0.27
TPM1-219ENST00000559397 STMN4Q9H169 189 aaPredicted RBP16.71■□□□□ 0.27
TPM1-219ENST00000559397 TNKS2Q9H2K2 1166 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 MTG2Q9H4K7 406 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 GLOD4Q9HC38 313 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 SLC24A2Q9UI40 661 aa16.71■□□□□ 0.27
TPM1-219ENST00000559397 CKAP5Q14008 2032 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 EXOC1LA0A1B0GW35 172 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 PDGFBP01127 241 aaPredicted RBP16.7■□□□□ 0.26
TPM1-219ENST00000559397 C1QAP02745 245 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 CR2P20023 1033 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 WASP42768 502 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 MAXP61244 160 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 RHOAP61586 193 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 GAS6Q14393 721 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 PRPSAP1Q14558 356 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 HSF5Q4G112 596 aaPredicted RBP16.7■□□□□ 0.26
TPM1-219ENST00000559397 CWF19L1Q69YN2 538 aaKnown RBP16.7■□□□□ 0.26
TPM1-219ENST00000559397 ALG1LQ6GMV1 187 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 PKN3Q6P5Z2 889 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 CAPN12Q6ZSI9 719 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 Q6ZVU0 165 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 PLPP6Q8IY26 295 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 FBF1Q8TES7 1133 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 VOPP1Q96AW1 172 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 OXNAD1Q96HP4 312 aaPredicted RBP16.7■□□□□ 0.26
TPM1-219ENST00000559397 EXOC2Q96KP1 924 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 PPP1R2P1Q96PQ5 205 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 TM6SF2Q9BZW4 377 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 CASS4Q9NQ75 786 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 SLC8A2Q9UPR5 921 aa16.7■□□□□ 0.26
TPM1-219ENST00000559397 EDDM13A0A1B0GTR0 161 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 SDR42E2A6NKP2 422 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 CHURC1-FNTBB4DL54 471 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 GJB3O75712 270 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 KLF8O95600 359 aaPredicted RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 GSRP00390 522 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 CPP00450 1065 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 CARD16Q5EG05 197 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 ATXN7L2Q5T6C5 722 aaPredicted RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 C9orf64Q5T6V5 341 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 STEAP4Q687X5 459 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 MPP5Q8N3R9 675 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 TXNDC5Q8NBS9 432 aaKnown RBP16.69■□□□□ 0.26
TPM1-219ENST00000559397 OR2AP1Q8NGE2 309 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 OR2A12Q8NGT7 310 aa16.69■□□□□ 0.26
TPM1-219ENST00000559397 NSMCE3Q96MG7 304 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms