RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ARMC3Q5W041 872 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 RNF43Q68DV7 783 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 KIAA0930Q6ICG6 404 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 FAM47EQ6ZV65 393 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 DCLK2Q8N568 766 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 PPHLN1Q8NEY8 458 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 RIN3Q8TB24 985 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 IARS2Q9NSE4 1012 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 MROH6A6NGR9 719 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 PRAMEF12O95522 483 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CSE1LP55060 971 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 OXCT1P55809 520 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 ITIH4Q14624 930 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CYTH1Q15438 398 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SLC14A2Q15849 920 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CNGA3Q16281 694 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 HTR3DQ70Z44 454 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CMC1Q7Z7K0 106 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SPATS2Q86XZ4 545 aaKnown RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 NPAS3Q8IXF0 933 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SMRP1Q8NCR6 262 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 CCDC197Q8NCU1 140 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 ST13P5Q8NFI4 369 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 OR13J1Q8NGT2 312 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 FGF13Q92913 245 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 SLC13A1Q9BZW2 595 aa13.07□□□□□ -0.32
SMAD3-207ENST00000558763 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-207ENST00000558763 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 SNAP91O60641 907 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 TBL1XO60907 577 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 VAPBO95292 243 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 MZF1P28698 734 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 IFT88Q13099 833 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 RFTN1Q14699 578 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 PPM1JQ5JR12 505 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 RNF219Q5W0B1 726 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 ZNF783Q6ZMS7 281 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 YTHDF3Q7Z739 585 aaKnown RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 SRLQ86TD4 932 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 DENND6AQ8IWF6 608 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 HJURPQ8NCD3 748 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 LRRC8CQ8TDW0 803 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 VPS39Q96JC1 886 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 FEM1CQ96JP0 617 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 RIPOR3Q96MK2 946 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 DDX50Q9BQ39 737 aaKnown RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 SPON2Q9BUD6 331 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 UBE2ZQ9H832 354 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 NOD2Q9HC29 1040 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 SNX15Q9NRS6 342 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 SEPT3Q9UH03 358 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 CD207Q9UJ71 328 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 PHTF1Q9UMS5 762 aa13.06□□□□□ -0.32
SMAD3-207ENST00000558763 MTO1Q9Y2Z2 717 aaKnown RBP13.06□□□□□ -0.32
SMAD3-207ENST00000558763 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 LDB2O43679 373 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 PAPSS2O95340 614 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 EPOP01588 193 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SPRP35270 261 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 DLG2Q15700 870 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 TSTD2Q5T7W7 516 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SPATA21Q7Z572 469 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CLEC14AQ86T13 490 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 USP13Q92995 863 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 ATXN7L3BQ96GX2 97 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CABS1Q96KC9 395 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 GPR22Q99680 433 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 FEM1AQ9BSK4 669 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 MECRQ9BV79 373 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SIRPGQ9P1W8 387 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CFAP97Q9P2B7 532 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 ARHGAP26Q9UNA1 814 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 STARD13Q9Y3M8 1113 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 USP15Q9Y4E8 981 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-207ENST00000558763 HEATR9A2RTY3 570 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 LEFTY2O00292 366 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 PRLP01236 227 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 AHSGP02765 367 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 PFKLP17858 780 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 MPP1Q00013 466 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 CDK18Q07002 472 aa13.05□□□□□ -0.32
SMAD3-207ENST00000558763 SEPT6Q14141 434 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms