RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 KIF5AQ12840 1032 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 TFDP2Q14188 446 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 UGP2Q16851 508 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 KIF19Q2TAC6 998 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 ZNF284Q2VY69 593 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 ERAP2Q6P179 960 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 DBX2Q6ZNG2 339 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 PARS2Q7L3T8 475 aaKnown RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 NDUFAF2Q8N183 169 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 TEX26Q8N6G2 289 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 PAF1Q8N7H5 531 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 OR6K2Q8NGY2 324 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 RAPGEF5Q92565 580 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 KLHDC7BQ96G42 594 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 C1QTNF2Q9BXJ5 285 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 TMEM121BQ9BXQ6 578 aaPredicted RBP8.57□□□□□ -1.04
TPM1-213ENST00000558400 EBF2Q9HAK2 575 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 GDF3Q9NR23 364 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 TM7SF3Q9NS93 570 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 KCTD5Q9NXV2 234 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 ZMIZ1Q9ULJ6 1067 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 PCDHB9Q9Y5E1 797 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 SNX11Q9Y5W9 270 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 SPEGQ15772 3267 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 CHD5Q8TDI0 1954 aa8.57□□□□□ -1.04
TPM1-213ENST00000558400 A0A1W2PR77 199 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 TSPAN11A1L157 253 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 SOWAHDA6NJG2 315 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 APOL1O14791 398 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PJA2O43164 708 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 NRDCO43847 1150 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PCDHGA12O60330 932 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 BUB1BO60566 1050 aaPredicted RBP8.56□□□□□ -1.04
TPM1-213ENST00000558400 SOCS5O75159 536 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 TM7SF2O76062 418 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 KCNK5O95279 499 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PAK4O96013 591 aaPredicted RBP8.56□□□□□ -1.04
TPM1-213ENST00000558400 CCNB1P14635 433 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 RXRGP48443 463 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 VAV2P52735 878 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PPP2CBP62714 309 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PPP2CAP67775 309 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PDK1Q15118 436 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 ZNF423Q2M1K9 1284 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 INAVAQ3KP66 663 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 TMEM52BQ4KMG9 183 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 TMEM259Q4ZIN3 620 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 NCBP2-AS2Q69YL0 99 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 SLC9A4Q6AI14 798 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 C11orf63Q6NUN7 778 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 ARHGAP36Q6ZRI8 547 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PIP4P1Q86T03 277 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 DAAM2Q86T65 1068 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 KIAA1328Q86T90 577 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 CAMK1DQ8IU85 385 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 PQLC3Q8N755 202 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 TMEM145Q8NBT3 493 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 CCNYQ8ND76 341 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 DENND6BQ8NEG7 585 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 KIAA1524Q8TCG1 905 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 CXorf40AQ8TE69 158 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 IFT43Q96FT9 208 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 EXOC2Q96KP1 924 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 SLC6A18Q96N87 628 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 NUDCD1Q96RS6 583 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 ELF4Q99607 663 aaPredicted RBP8.56□□□□□ -1.04
TPM1-213ENST00000558400 MGME1Q9BQP7 344 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 ZFR2Q9UPR6 939 aaKnown RBP8.56□□□□□ -1.04
TPM1-213ENST00000558400 CEP192Q8TEP8 1941 aa8.56□□□□□ -1.04
TPM1-213ENST00000558400 A0A1B0GTQ1 180 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 IGLON5A6NGN9 336 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 C3orf70A6NLC5 250 aaPredicted RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 RNF103O00237 685 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 TRAFD1O14545 582 aaPredicted RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 FPGTO14772 594 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 PPP1R12AO14974 1030 aaPredicted RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 INSIG1O15503 277 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 FLRT2O43155 660 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 PEX11BO96011 259 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 KRT1P04264 644 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 TNNT1P13805 278 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CD59P13987 128 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CR2P20023 1033 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CA4P22748 312 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 RABIFP47224 123 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CCT8P50990 548 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 NOVA1P51513 510 aaKnown RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 NXPH1P58417 271 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 COPS2P61201 443 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 BNC1Q01954 994 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 ITKQ08881 620 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 TFDP3Q5H9I0 405 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 N4BP2L1Q5TBK1 243 aaPredicted RBP8.55□□□□□ -1.04
TPM1-213ENST00000558400 RAD9BQ6WBX8 426 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CPNE8Q86YQ8 564 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 RFX6Q8HWS3 928 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 TP53INP2Q8IXH6 220 aa8.55□□□□□ -1.04
TPM1-213ENST00000558400 CCDC13Q8IYE1 715 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms