RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TIE1P35590 1138 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ELK3P41970 407 aa17■□□□□ 0.31
SNX1-203ENST00000558040 KIR2DL1P43626 348 aaPredicted RBP17■□□□□ 0.31
SNX1-203ENST00000558040 CHRNA4P43681 627 aa17■□□□□ 0.31
SNX1-203ENST00000558040 GRIA4P48058 902 aa17■□□□□ 0.31
SNX1-203ENST00000558040 EPHB1P54762 984 aa17■□□□□ 0.31
SNX1-203ENST00000558040 SEC13P55735 322 aa17■□□□□ 0.31
SNX1-203ENST00000558040 LAMB3Q13751 1172 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ENPP2Q13822 863 aa17■□□□□ 0.31
SNX1-203ENST00000558040 GALNT3Q14435 633 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ELAVL3Q14576 367 aaKnown RBP17■□□□□ 0.31
SNX1-203ENST00000558040 GDPD4Q6W3E5 623 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ZNF852Q6ZMS4 543 aa17■□□□□ 0.31
SNX1-203ENST00000558040 DSG4Q86SJ6 1040 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ANKMY2Q8IV38 441 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PALM2Q8IXS6 379 aa17■□□□□ 0.31
SNX1-203ENST00000558040 NDUFAF2Q8N183 169 aa17■□□□□ 0.31
SNX1-203ENST00000558040 ZNF366Q8N895 744 aa17■□□□□ 0.31
SNX1-203ENST00000558040 CHST14Q8NCH0 376 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PPHLN1Q8NEY8 458 aaKnown RBP17■□□□□ 0.31
SNX1-203ENST00000558040 LPCAT1Q8NF37 534 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PTCD2Q8WV60 388 aaKnown RBP17■□□□□ 0.31
SNX1-203ENST00000558040 SIGLEC10Q96LC7 697 aa17■□□□□ 0.31
SNX1-203ENST00000558040 NSMCE3Q96MG7 304 aa17■□□□□ 0.31
SNX1-203ENST00000558040 EBNA1BP2Q99848 306 aaKnown RBP17■□□□□ 0.31
SNX1-203ENST00000558040 PABPC3Q9H361 631 aaKnown RBP17■□□□□ 0.31
SNX1-203ENST00000558040 SUV39H2Q9H5I1 410 aa17■□□□□ 0.31
SNX1-203ENST00000558040 SYBUQ9NX95 663 aa17■□□□□ 0.31
SNX1-203ENST00000558040 CACNA2D2Q9NY47 1150 aa17■□□□□ 0.31
SNX1-203ENST00000558040 CHMP2BQ9UQN3 213 aa17■□□□□ 0.31
SNX1-203ENST00000558040 PCDHB9Q9Y5E1 797 aa17■□□□□ 0.31
SNX1-203ENST00000558040 TRAFD1O14545 582 aaPredicted RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 FZD6O60353 706 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 SIN3BO75182 1162 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 SPAG6O75602 509 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 TTC4O95801 387 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 PRLP01236 227 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 PRNPP04156 253 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 HLA-EP13747 358 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 GKP32189 559 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 PHBP35232 272 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 MRPS21P82921 87 aaKnown RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 FASTKD3Q14CZ7 662 aaKnown RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 HSF5Q4G112 596 aaPredicted RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 PCID2Q5JVF3 399 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 HP1BP3Q5SSJ5 553 aaPredicted RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 CERCAMQ5T4B2 595 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 C9orf64Q5T6V5 341 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 EMC10Q5UCC4 262 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 HDXQ7Z353 690 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 UBALD2Q8IYN6 164 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 GRIN3AQ8TCU5 1115 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 EZH1Q92800 747 aaPredicted RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 SHDQ96IW2 340 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 C9orf72Q96LT7 481 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 SRPK1Q96SB4 655 aaKnown RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 SEMA4AQ9H3S1 761 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 ARHGEF3Q9NR81 526 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 NINJ2Q9NZG7 142 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 WNT16Q9UBV4 365 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 ZC3H7BQ9UGR2 993 aaKnown RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 FBXL21Q9UKT6 434 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 HCN2Q9UL51 889 aa16.99■□□□□ 0.31
SNX1-203ENST00000558040 MRPS17Q9Y2R5 130 aaKnown RBP16.99■□□□□ 0.31
SNX1-203ENST00000558040 HEATR9A2RTY3 570 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 ANKRD66B4E2M5 251 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 RIPK2O43353 540 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 SYNCRIPO60506 623 aaKnown RBP16.98■□□□□ 0.31
SNX1-203ENST00000558040 LEFTY1O75610 366 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 UGT2B4P06133 528 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 PDHA1P08559 390 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 GSTA2P09210 222 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 TPH1P17752 444 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 PGAM1P18669 254 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 NFKBIAP25963 317 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 NTSR1P30989 418 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 HSD17B3P37058 310 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 POLR2LP62875 67 aaKnown RBP16.98■□□□□ 0.31
SNX1-203ENST00000558040 KYNUQ16719 465 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 DENND2CQ68D51 928 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 BRAT1Q6PJG6 821 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 STK40Q8N2I9 435 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 MPP5Q8N3R9 675 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 TMIEQ8NEW7 156 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 HCAR2Q8TDS4 363 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 SPOCK2Q92563 424 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 ECHDC3Q96DC8 303 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 ASB2Q96Q27 587 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 RANBP9Q96S59 729 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 ACOX2Q99424 681 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 MTG2Q9H4K7 406 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 MRM3Q9HC36 420 aaKnown RBP16.98■□□□□ 0.31
SNX1-203ENST00000558040 HACD3Q9P035 362 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 CA14Q9ULX7 337 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 PHTF1Q9UMS5 762 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 WASF2Q9Y6W5 498 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 MYO10Q9HD67 2058 aa16.98■□□□□ 0.31
SNX1-203ENST00000558040 C1QTNF3-AMACRE9PGA6 284 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 ACSL3O95573 720 aa16.97■□□□□ 0.31
SNX1-203ENST00000558040 POLBP06746 335 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms