RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SMC6Q96SB8 1091 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 PRO3102Q9H379 93 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 CNOT10Q9H9A5 744 aaKnown RBP20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 PRKAG3Q9UGI9 489 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 SLCO3A1Q9UIG8 710 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 MIA3Q5JRA6 1907 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 KRT37O76014 449 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 MT-ND3P03897 115 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC8A1P32418 973 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 MESP2Q0VG99 397 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 SRLQ86TD4 932 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 CAMK1DQ8IU85 385 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 PTCD2Q8WV60 388 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 MYADMQ96S97 322 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 RABEP2Q9H5N1 569 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 CLDND1Q9NY35 253 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 CDH7Q9ULB5 785 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 SPO11Q9Y5K1 396 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 ACTL7BQ9Y614 415 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 A0A0U1RQS6 177 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 AURKAO14965 403 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 LDB2O43679 373 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 SNRPAP09012 282 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 CES1P23141 567 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 ARCN1P48444 511 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 ACCSLQ4AC99 568 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 RYBPQ8N488 228 aaPredicted RBP20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 PNPLA1Q8N8W4 532 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 MRM3Q9HC36 420 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 TXNDC16Q9P2K2 825 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 PCDHB9Q9Y5E1 797 aa20.56■□□□□ 0.88
SNRPA1-205ENST00000558036 NUP210Q8TEM1 1887 aaPredicted RBP20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 KRT38O76015 456 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 PIGNO95427 931 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC4A1P02730 911 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 PYGBP11216 843 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 ECT2LQ008S8 904 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 ATAT1Q5SQI0 421 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 TSTD2Q5T7W7 516 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 STRA8Q7Z7C7 330 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 OR13J1Q8NGT2 312 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 TTC8Q8TAM2 541 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 CYB5D2Q8WUJ1 264 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 S1PR5Q9H228 398 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 C12orf65Q9H3J6 166 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 HS3ST2Q9Y278 367 aa20.55■□□□□ 0.88
SNRPA1-205ENST00000558036 MROH6A6NGR9 719 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 SHOX2O60902 331 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 RPA3P35244 121 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 ARSDP51689 593 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 TMPRSS15P98073 1019 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 FRG1Q14331 258 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 GRIN2CQ14957 1233 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC14A2Q15849 920 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 MBLAC2Q68D91 279 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 PDPK2PQ6A1A2 396 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 VITQ6UXI7 678 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 DENND6AQ8IWF6 608 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 RANBP9Q96S59 729 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 TTYH1Q9H313 450 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 INTS9Q9NV88 658 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 SENP1Q9P0U3 644 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 GGT7Q9UJ14 662 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 ADH1CP00326 375 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 HOXB8P17481 243 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 GRM2Q14416 872 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 CES5AQ6NT32 575 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 KXD1Q9BQD3 176 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 PLA2G2FQ9BZM2 168 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 ZFP14Q9HCL3 533 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC25A13Q9UJS0 675 aa20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 ARIH1Q9Y4X5 557 aaPredicted RBP20.54■□□□□ 0.88
SNRPA1-205ENST00000558036 RFPL1O75677 317 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 CA4P22748 312 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 GBP2P32456 591 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 LSP1P33241 339 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 DGKGP49619 791 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 AP1S1P61966 158 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC20A2Q08357 652 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 CTBP1Q13363 440 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 LGSNQ5TDP6 509 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 NAIF1Q69YI7 327 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 C22orf39Q6P5X5 142 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 OR13C4Q8NGS5 318 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ATXN2LQ8WWM7 1075 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 CPNE1Q99829 537 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 FAM83CQ9BQN1 747 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 CIPCQ9C0C6 399 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 SUDS3Q9H7L9 328 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 TRPV4Q9HBA0 871 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 FAM47DPA6NHR8 397 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ANKRD66B4E2M5 251 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 TYROBPO43914 113 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 TULP3O75386 442 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ITGA2BP08514 1039 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ALADP13716 330 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 GP5P40197 560 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 ABL2P42684 1182 aa20.53■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC6A11P48066 632 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms