RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TCAF2A6NFQ2 919 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 SUV39H1O43463 412 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PROM1O43490 865 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PRPSAP2O60256 369 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 RTN2O75298 545 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 USP12O75317 370 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 OLFM2O95897 454 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 MBPP02686 304 aaPredicted RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 IL6RP08887 468 aaPredicted RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 EEF2P13639 858 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 IL7RP16871 459 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 TNFRSF1AP19438 455 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PRKCIP41743 596 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 DIO1P49895 249 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 RABGGTBP53611 331 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 TEFQ10587 303 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ITGA7Q13683 1181 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 CAPSQ13938 189 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 LASP1Q14847 261 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 DRAP1Q14919 205 aaPredicted RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 SNAPC1Q16533 368 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 TOR1AIP1Q5JTV8 583 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 C1QL3Q5VWW1 255 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PMS2CLQ68D20 193 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 KRT39Q6A163 491 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 GALNT17Q6IS24 598 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ARMC6Q6NXE6 501 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 WDR73Q6P4I2 378 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 UNC5DQ6UXZ4 953 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PPP1R21Q6ZMI0 780 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PRR23BQ6ZRT6 265 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 SEPT14Q6ZU15 432 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 HTR3DQ70Z44 454 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 MCM10Q7L590 875 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 SPATA19Q7Z5L4 167 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 AACSQ86V21 672 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 TAX1BP1Q86VP1 789 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 LURAP1LQ8IV03 231 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ARID3BQ8IVW6 561 aaPredicted RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 RNF168Q8IYW5 571 aaPredicted RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 RP9Q8TA86 221 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 DENND1AQ8TEH3 1009 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 FAM168AQ92567 244 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 CORO2AQ92828 525 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 PABPC5Q96DU9 382 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 PDLIM5Q96HC4 596 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 LOXL4Q96JB6 756 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 DACH2Q96NX9 599 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 TSGA13Q96PP4 275 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 TEFMQ96QE5 360 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 FAM118BQ9BPY3 351 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ALOXE3Q9BYJ1 711 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 SLC5A7Q9GZV3 580 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 MRPL44Q9H9J2 332 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 PIH1D3Q9NQM4 214 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 CHCHD3Q9NX63 227 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 EHD3Q9NZN3 535 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 ARMCX3Q9UH62 379 aaPredicted RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 DDX25Q9UHL0 483 aaKnown RBP3.9□□□□□ -1.79
TDP1-217ENST00000557782 PLAGL1Q9UM63 463 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 COG5Q9UP83 839 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 CHST2Q9Y4C5 530 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 LIPGQ9Y5X9 500 aa3.9□□□□□ -1.79
TDP1-217ENST00000557782 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 A0A1B0GTL3 188 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 HTR3EA5X5Y0 456 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 ENO4A6NNW6 628 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CAPN14A8MX76 684 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 NPIPB11E5RHQ5 1161 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 IFIT3O14879 490 aaKnown RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 CYP27B1O15528 508 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 SEC14L5O43304 696 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 B4GALT3O60512 393 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 ADAMTS4O75173 837 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 SLCO2B1O94956 709 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CAMTA2O94983 1202 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 TRUB2O95900 331 aaKnown RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 MT-CYBP00156 380 aaPredicted RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 TPM2P07951 284 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 FCGR2AP12318 317 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 MMP9P14780 707 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 PDGFRAP16234 1089 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 PI3P19957 117 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CTGFP29279 349 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 HSPA4P34932 840 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 PTGER1P34995 402 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 CASP3P42574 277 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 ARSEP51690 589 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 HNRNPMP52272 730 aaKnown RBP eCLIP3.89□□□□□ -1.79
TDP1-217ENST00000557782 ARSFP54793 590 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 SLC12A3P55017 1021 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 STX1BP61266 288 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 WDR5P61964 334 aaKnown RBP3.89□□□□□ -1.79
TDP1-217ENST00000557782 PPP2CBP62714 309 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 PPP2CAP67775 309 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 FOXL1Q12952 345 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 BMPR2Q13873 1038 aa3.89□□□□□ -1.79
TDP1-217ENST00000557782 ZNF273Q14593 569 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms