RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CELA2BP08218 269 aaPredicted RBP16.12■□□□□ 0.17
SCFD1-224ENST00000557713 EPHB2P29323 1055 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 STAT1P42224 750 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 NSFP46459 744 aaKnown RBP16.12■□□□□ 0.17
SCFD1-224ENST00000557713 PEX5P50542 639 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 SUOXP51687 545 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 PDX1P52945 283 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 RHOAP61586 193 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 PPARDQ03181 441 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 VAC14Q08AM6 782 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 SERINC3Q13530 473 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 KRT31Q15323 416 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 CYTH1Q15438 398 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 CLEC16AQ2KHT3 1053 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 ZNF354CQ86Y25 554 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 UMODL1-AS1Q8N2C9 162 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 C3orf20Q8ND61 904 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 NAT6Q93015 286 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 HMCESQ96FZ2 354 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 CCDC3Q9BQI4 270 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 SELENOOQ9BVL4 669 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 LHX3Q9UBR4 397 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 SIK3Q9Y2K2 1263 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 DAAM1Q9Y4D1 1078 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 ATMQ13315 3056 aa16.12■□□□□ 0.17
SCFD1-224ENST00000557713 TSPAN11A1L157 253 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 CAPN8A6NHC0 703 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 TMEM110-MUSTN1A8MSY1 372 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 RASA4BC9J798 803 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 CCP110O43303 1012 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 RASA4O43374 803 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 BLKP51451 505 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 HK3P52790 923 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 LRRC14Q15048 493 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 IRF4Q15306 451 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 WSCD2Q2TBF2 565 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 PARP15Q460N3 678 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 TAF1BQ53T94 588 aaPredicted RBP16.11■□□□□ 0.17
SCFD1-224ENST00000557713 EFHC2Q5JST6 749 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 ESRP1Q6NXG1 681 aaKnown RBP16.11■□□□□ 0.17
SCFD1-224ENST00000557713 LVRNQ6Q4G3 990 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 FSTL5Q8N475 847 aaPredicted RBP16.11■□□□□ 0.17
SCFD1-224ENST00000557713 WDR36Q8NI36 951 aaKnown RBP16.11■□□□□ 0.17
SCFD1-224ENST00000557713 TTC9Q92623 222 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 FZD10Q9ULW2 581 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 COQ6Q9Y2Z9 468 aa16.11■□□□□ 0.17
SCFD1-224ENST00000557713 PIGNO95427 931 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 CALB1P05937 261 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 MLLT3P42568 568 aaPredicted RBP16.1■□□□□ 0.17
SCFD1-224ENST00000557713 ZNF143P52747 638 aaPredicted RBP16.1■□□□□ 0.17
SCFD1-224ENST00000557713 ELP6Q0PNE2 266 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 AGERQ15109 404 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 ELOCQ15369 112 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 UGP2Q16851 508 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 FKBP15Q5T1M5 1219 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 SCYL2Q6P3W7 929 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 MON1BQ7L1V2 547 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 CLEC14AQ86T13 490 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 ARL14Q8N4G2 192 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 TSACCQ96A04 125 aaPredicted RBP16.1■□□□□ 0.17
SCFD1-224ENST00000557713 CCDC97Q96F63 343 aaPredicted RBP16.1■□□□□ 0.17
SCFD1-224ENST00000557713 APOOQ9BUR5 198 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 EDEM3Q9BZQ6 932 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 SUV39H2Q9H5I1 410 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 GULP1Q9UBP9 304 aa16.1■□□□□ 0.17
SCFD1-224ENST00000557713 SETXQ7Z333 2677 aaKnown RBP16.1■□□□□ 0.17
SCFD1-224ENST00000557713 CCDC187A0A096LP49 1063 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 K7ENP7 123 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 CREB3O43889 395 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 BUB1BO60566 1050 aaPredicted RBP16.09■□□□□ 0.17
SCFD1-224ENST00000557713 TNFSF15O95150 251 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 ALPIP09923 528 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 AIF1P55008 147 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 RPL7AP62424 266 aaKnown RBP16.09■□□□□ 0.17
SCFD1-224ENST00000557713 SPIDRQ14159 915 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 INPP5AQ14642 412 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 GRM3Q14832 879 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 ALG11Q2TAA5 492 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 PPP1R15BQ5SWA1 713 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 INO80CQ6PI98 192 aaPredicted RBP16.09■□□□□ 0.17
SCFD1-224ENST00000557713 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 DNAAF5Q86Y56 855 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 HID1Q8IV36 788 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 SDR16C5Q8N3Y7 309 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 ARL10Q8N8L6 244 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 SCG3Q8WXD2 468 aaKnown RBP16.09■□□□□ 0.17
SCFD1-224ENST00000557713 EXOC2Q96KP1 924 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 SEMA4CQ9C0C4 833 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 LRRC19Q9H756 370 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 CATSPERBQ9H7T0 1116 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 PDFQ9HBH1 243 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 PCDH12Q9NPG4 1184 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 FANCLQ9NW38 375 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 RABGEF1Q9UJ41 708 aa16.09■□□□□ 0.17
SCFD1-224ENST00000557713 J3KR12 359 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 RASGRP1O95267 797 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 C6P13671 934 aa16.08■□□□□ 0.16
SCFD1-224ENST00000557713 CTSEP14091 401 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms