RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SEMA6AQ9H2E6 1030 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 MARCH4Q9P2E8 410 aaPredicted RBP17.85■□□□□ 0.45
XRCC3-218ENST00000557439 GIMAP2Q9UG22 337 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 RIMS3Q9UJD0 308 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 APPL1Q9UKG1 709 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 CRYL1Q9Y2S2 319 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 UNCXA6NJT0 531 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 ME2P23368 584 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 NME5P56597 212 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 CDKL1Q00532 357 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 TECRLQ5HYJ1 363 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 PITRM1Q5JRX3 1037 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 POTEHQ6S545 545 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 APLFQ8IW19 511 aaPredicted RBP17.85■□□□□ 0.45
XRCC3-218ENST00000557439 OR6P1Q8NGX9 317 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 SPPL2BQ8TCT7 592 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 RSPH1Q8WYR4 309 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 ATP6V1E2Q96A05 226 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 HMCESQ96FZ2 354 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 UBE2OQ9C0C9 1292 aaKnown RBP17.85■□□□□ 0.45
XRCC3-218ENST00000557439 CATSPERBQ9H7T0 1116 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 EFCAB1Q9HAE3 211 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 ENTPD7Q9NQZ7 604 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 CLIC5Q9NZA1 410 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 VTI1BQ9UEU0 232 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 GIT1Q9Y2X7 761 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 PTGDR2Q9Y5Y4 395 aa17.85■□□□□ 0.45
XRCC3-218ENST00000557439 A0A1B0GVG6 124 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 C9JVG2 144 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 E7ENX8 843 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 PSMD3O43242 534 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 RNASEH2AO75792 299 aaKnown RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CSPG5O95196 566 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 PIRTP0C851 137 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 FGFR3P22607 806 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 ATP5F1P24539 256 aaPredicted RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 ADGRE1Q14246 886 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 SLC39A12Q504Y0 691 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 GPR158Q5T848 1215 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 SPATA2LQ8IUW3 424 aaPredicted RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 OR13J1Q8NGT2 312 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 HAPLN3Q96S86 360 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 ALG9Q9H6U8 611 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 ABCC13Q9NSE7 274 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 A0A1B0GTW7 788 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 PPP6CO00743 305 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 UBFD1O14562 309 aaKnown RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 TNFRSF10BO14763 440 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 SOAT2O75908 522 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CRTAMO95727 393 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 COL6A2P12110 1019 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 GRK4P32298 578 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CHN2P52757 468 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CDKN2DP55273 166 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CDH13P55290 713 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 PTK2BQ14289 1009 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 TAF1CQ15572 869 aaPredicted RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 AGKQ53H12 422 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 FBXO48Q5FWF7 155 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 IL23RQ5VWK5 629 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 KIAA0930Q6ICG6 404 aaPredicted RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 KDELC1Q6UW63 502 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CUZD1Q86UP6 607 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 RTL3Q8N8U3 475 aaKnown RBP17.84■□□□□ 0.45
XRCC3-218ENST00000557439 CCDC28BQ9BUN5 200 aa17.84■□□□□ 0.45
XRCC3-218ENST00000557439 TDRD15B5MCY1 1934 aaKnown RBP17.83■□□□□ 0.45
XRCC3-218ENST00000557439 LRRC14BA6NHZ5 514 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 FBP2O00757 339 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 PEX11BO96011 259 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 HMBSP08397 361 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 SPATA31D3P0C874 917 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 RPL9P32969 192 aaKnown RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 PDAP1Q13442 181 aaKnown RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 CYP2R1Q6VVX0 501 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 SPATA31D4Q6ZUB0 917 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 RYBPQ8N488 228 aaPredicted RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 TTC9BQ8N6N2 239 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 CEP70Q8NHQ1 597 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 FAM110BQ8TC76 370 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 ADAM2Q99965 735 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 SMOC2Q9H3U7 446 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 PCDHGA7Q9Y5G6 932 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 AP4B1Q9Y6B7 739 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 FNDC1Q4ZHG4 1894 aaPredicted RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 NLRC5Q86WI3 1866 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 ACOT8O14734 319 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 HOXC13P31276 330 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 USP46P62068 366 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 ROR2Q01974 943 aaKnown RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 IYDQ6PHW0 289 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 HDAC10Q969S8 669 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 PSMG2Q969U7 264 aa17.83■□□□□ 0.44
XRCC3-218ENST00000557439 MAELQ96JY0 434 aaKnown RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 C6orf203Q9P0P8 240 aaPredicted RBP17.83■□□□□ 0.44
XRCC3-218ENST00000557439 MYO16Q9Y6X6 1858 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PTPRDP23468 1912 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 AP3B1O00203 1094 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 NPHS1O60500 1241 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 PRSS56P0CW18 603 aa17.82■□□□□ 0.44
XRCC3-218ENST00000557439 SMIM18P0DKX4 95 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms