RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 HEY1Q9Y5J3 304 aa12.61□□□□□ -0.39
SLIRP-209ENST00000557342 SLCO1B1Q9Y6L6 691 aa12.61□□□□□ -0.39
SLIRP-209ENST00000557342 FRYLO94915 3013 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 A0A1W2PR77 199 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CCDC66A2RUB6 948 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 UPK3BL1B0FP48 263 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 UPK3BL2E5RIL1 263 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 TLR4O00206 839 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 TM4SF5O14894 197 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 SLC31A1O15431 190 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 SOCS5O75159 536 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 MAP3K6O95382 1288 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 ZNF883P0CG24 379 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CCNB1P14635 433 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 TGM2P21980 687 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CTNNA2P26232 953 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CTNNA1P35221 906 aaKnown RBP12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CETN2P41208 172 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CTSKP43235 329 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 NR2C2P49116 596 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 COPS2P61201 443 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 BNC1Q01954 994 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 PPIDQ08752 370 aaKnown RBP12.6□□□□□ -0.39
SLIRP-209ENST00000557342 ITKQ08881 620 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 SLC10A2Q12908 348 aaPredicted RBP12.6□□□□□ -0.39
SLIRP-209ENST00000557342 KIF19Q2TAC6 998 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 HLA-BQ31612 363 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 TMEM52BQ4KMG9 183 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 ERMP1Q7Z2K6 904 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 CCDC50Q8IVM0 306 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 TMEM145Q8NBT3 493 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 KLK6Q92876 244 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 C1QTNF7Q9BXJ2 289 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 NT5MQ9NPB1 228 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.397e-6■■■□□ 17.4
SLIRP-209ENST00000557342 AMFRQ9UKV5 643 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 SNX11Q9Y5W9 270 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
SLIRP-209ENST00000557342 ASCC3Q8N3C0 2202 aaKnown RBP12.6□□□□□ -0.39
SLIRP-209ENST00000557342 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 GRID2IPA4D2P6 1211 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 IGLON5A6NGN9 336 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 TRAFD1O14545 582 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 HTRA2O43464 458 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 KRT86O43790 486 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 CST8O60676 142 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 GJB3O75712 270 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 TM7SF2O76062 418 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 PAK4O96013 591 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 WNT1P04628 370 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 PRLRP16471 622 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 CA4P22748 312 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 RWDD2BP57060 319 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 MAXP61244 160 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 DYNLT1P63172 113 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 AP1B1Q10567 949 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 PPP2R5EQ16537 467 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 ZNF423Q2M1K9 1284 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 KAZNQ674X7 775 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 LAYNQ6UX15 382 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 PEX26Q7Z412 305 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 LRRC8AQ8IWT6 810 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 OXR1Q8N573 874 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 RNF10Q8N5U6 811 aaKnown RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 LRRC57Q8N9N7 239 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 DENND6BQ8NEG7 585 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 UBE2Q2Q8WVN8 375 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 KRT35Q92764 455 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 KLHDC7BQ96G42 594 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 OLFM3Q96PB7 478 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 LENG8Q96PV6 779 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-209ENST00000557342 C1QTNF2Q9BXJ5 285 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 SLC32A1Q9H598 525 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 PCDH12Q9NPG4 1184 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 GDF3Q9NR23 364 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 ITM2BQ9Y287 266 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 ATP8A1Q9Y2Q0 1164 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
SLIRP-209ENST00000557342 hCG_1818297A0A087WSY0 165 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 CFAP69A5D8W1 941 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 A6NNZ2 444 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
SLIRP-209ENST00000557342 FPGTO14772 594 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 WNT9AO14904 365 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 YKT6O15498 198 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 SPINT1O43278 529 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 KRT10P13645 584 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 MARCKSL1P49006 195 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 CCT8P50990 548 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 NXPH1P58417 271 aa12.58□□□□□ -0.4
SLIRP-209ENST00000557342 IFI35P80217 286 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms