RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 EIF2S3P41091 472 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 PRKCIP41743 596 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 ZNF165P49910 485 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 KLHL30Q0D2K2 578 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 EIF2B5Q13144 721 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 IRF4Q15306 451 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 CA9Q16790 459 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 DEFB133Q30KQ1 61 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 PPP6R3Q5H9R7 873 aaPredicted RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 E4F1Q66K89 784 aaPredicted RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 CAVIN1Q6NZI2 390 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 ERAP2Q6P179 960 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 BRAT1Q6PJG6 821 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 LRRC69Q6ZNQ3 347 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 RFX8Q6ZV50 586 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 ZNF571Q7Z3V5 609 aaPredicted RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 PHACTR4Q8IZ21 702 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 RBFAQ8N0V3 343 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 SNIP1Q8TAD8 396 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 HCAR2Q8TDS4 363 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 ZNF653Q96CK0 615 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 TBATAQ96M53 351 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 ZNF641Q96N77 438 aaPredicted RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 TUBGCP5Q96RT8 1024 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 IL12RB2Q99665 862 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 ABCG4Q9H172 646 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 SP110Q9HB58 689 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 AIPL1Q9NZN9 384 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 CNOT8Q9UFF9 292 aaKnown RBP14.31□□□□□ -0.12
SNX6-210ENST00000557341 PCSK1NQ9UHG2 260 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 SALL4Q9UJQ4 1053 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 U3KQA8 63 aa14.31□□□□□ -0.12
SNX6-210ENST00000557341 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 TMEM191CA6NGB0 347 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 TPP1O14773 563 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 RRP8O43159 456 aaKnown RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 FTLP02792 175 aaPredicted RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 C6P13671 934 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 ITIH2P19823 946 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 SERPINA4P29622 427 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 EIF4A3P38919 411 aaKnown RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 PAPOLAP51003 745 aaKnown RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 ZNF135P52742 658 aaPredicted RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 CDKN3Q16667 212 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 UGP2Q16851 508 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 TMEM52BQ4KMG9 183 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 CDCP2Q5VXM1 449 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 MAPK15Q8TD08 544 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 GLMNQ92990 594 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 KCTD15Q96SI1 283 aaPredicted RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 LRRC61Q9BV99 259 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 CINPQ9BW66 212 aaPredicted RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 SLC13A1Q9BZW2 595 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 SLC39A8Q9C0K1 460 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 SUV39H2Q9H5I1 410 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 ATP13A3Q9H7F0 1226 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 MRPL47Q9HD33 250 aaKnown RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 PCDH12Q9NPG4 1184 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 MBNL1Q9NR56 388 aaKnown RBP14.3□□□□□ -0.12
SNX6-210ENST00000557341 COQ6Q9Y2Z9 468 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 PCDHB1Q9Y5F3 818 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 SCN8AQ9UQD0 1980 aa14.3□□□□□ -0.12
SNX6-210ENST00000557341 ARHGEF17Q96PE2 2063 aaPredicted RBP14.29□□□□□ -0.12
SNX6-210ENST00000557341 DFFAO00273 331 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 DDX3XO00571 662 aaKnown RBP eCLIP14.29□□□□□ -0.126e-10■■■■■ 32.8
SNX6-210ENST00000557341 CSO75390 466 aaKnown RBP14.29□□□□□ -0.12
SNX6-210ENST00000557341 LRCH4O75427 683 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 PALMO75781 387 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 SERPINC1P01008 464 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 MYBL1P10243 752 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 ERCC2P18074 760 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 MIPP30301 263 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 ACTN2P35609 894 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 MMP12P39900 470 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 PPARDQ03181 441 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 RFTN1Q14699 578 aaPredicted RBP14.29□□□□□ -0.12
SNX6-210ENST00000557341 LRRC14Q15048 493 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 NR0B2Q15466 257 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 TBC1D25Q3MII6 688 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 C6orf132Q5T0Z8 1188 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 GUSBP11Q6P575 273 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 CYP4V2Q6ZWL3 525 aaPredicted RBP14.29□□□□□ -0.12
SNX6-210ENST00000557341 ARHGAP12Q8IWW6 846 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 ARFGAP1Q8N6T3 406 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 NPWQ8N729 165 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 TSEN2Q8NCE0 465 aaKnown RBP14.29□□□□□ -0.12
SNX6-210ENST00000557341 EDEM3Q9BZQ6 932 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 TRIM7Q9C029 511 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 TCEAL2Q9H3H9 227 aaPredicted RBP14.29□□□□□ -0.12
SNX6-210ENST00000557341 ZWILCHQ9H900 591 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 ATP8A1Q9Y2Q0 1164 aa14.29□□□□□ -0.12
SNX6-210ENST00000557341 CPED1A4D0V7 1026 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 EME2A4GXA9 379 aaPredicted RBP14.28□□□□□ -0.12
SNX6-210ENST00000557341 LMO7DNF2Z398 122 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 LZTS3O60299 673 aaPredicted RBP14.28□□□□□ -0.12
SNX6-210ENST00000557341 GCATO75600 419 aa14.28□□□□□ -0.12
SNX6-210ENST00000557341 ANXA6P08133 673 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms