RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TBCBQ99426 244 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 INTS2Q9H0H0 1204 aaKnown RBP12.69□□□□□ -0.38
PSEN1-221ENST00000557293 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 COQ6Q9Y2Z9 468 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
PSEN1-221ENST00000557293 KRIT1O00522 736 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 SRGAP2O75044 1071 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 GSRP00390 522 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 LIFP15018 202 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 CD97P48960 835 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 NFATC4Q14934 902 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 PTPN20Q4JDL3 420 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 ATXN7L2Q5T6C5 722 aaPredicted RBP12.68□□□□□ -0.38
PSEN1-221ENST00000557293 LRRC31Q6UY01 552 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 BNIPLQ7Z465 357 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 PASD1Q8IV76 773 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 TRIM59Q8IWR1 403 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 OR2AP1Q8NGE2 309 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 OR1E3Q8WZA6 343 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
PSEN1-221ENST00000557293 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 WRAP53Q9BUR4 548 aaKnown RBP12.68□□□□□ -0.38
PSEN1-221ENST00000557293 SPRY4Q9C004 299 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 CDH19Q9H159 772 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 ZNF71Q9NQZ8 489 aaPredicted RBP12.68□□□□□ -0.38
PSEN1-221ENST00000557293 PCDHGA3Q9Y5H0 932 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 DGKBQ9Y6T7 804 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 NBPF19A0A087WUL8 3843 aa12.68□□□□□ -0.38
PSEN1-221ENST00000557293 CHD5Q8TDI0 1954 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 NKX2-8O15522 239 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 UGT1A3P35503 534 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 CCR10P46092 362 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 APBA1Q02410 837 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 INPP5AQ14642 412 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 LRRC14Q15048 493 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 CCDC40Q4G0X9 1142 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 C14orf28Q4W4Y0 310 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 PHF19Q5T6S3 580 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 TRNP1Q6NT89 227 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 TTI2Q6NXR4 508 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 FOXR2Q6PJQ5 311 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 GDPD4Q6W3E5 623 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 LEKR1Q6ZMV7 388 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 C17orf82Q86X59 251 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-221ENST00000557293 DRC7Q8IY82 874 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 RYBPQ8N488 228 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-221ENST00000557293 C1orf131Q8NDD1 294 aaKnown RBP12.67□□□□□ -0.38
PSEN1-221ENST00000557293 CCL4L1Q8NHW4 92 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 SNX21Q969T3 373 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 ARHGEF26Q96DR7 871 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 PDXPQ96GD0 296 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 GSDMAQ96QA5 445 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 TAAR9Q96RI9 348 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 HAPLN3Q96S86 360 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 RDH14Q9HBH5 336 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 LRRC4CQ9HCJ2 640 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 RRN3Q9NYV6 651 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.67□□□□□ -0.38
PSEN1-221ENST00000557293 OR1A2Q9Y585 309 aa12.67□□□□□ -0.38
PSEN1-221ENST00000557293 IGHV5-10-1A0A0J9YXX1 117 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 TMEM202A6NGA9 273 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 STMND1H3BQB6 276 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 NUDT21O43809 227 aaKnown RBP12.66□□□□□ -0.38
PSEN1-221ENST00000557293 DUX1O43812 170 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 TNFP01375 233 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 SULT1E1P49888 294 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 OR1D5P58170 312 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 RNASE9P60153 205 aaKnown RBP12.66□□□□□ -0.38
PSEN1-221ENST00000557293 DEUP1Q05D60 604 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 CETN1Q12798 172 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 AGERQ15109 404 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 RAB6CQ53S08 254 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 TMEM164Q5U3C3 297 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 NLRP14Q86W24 1093 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 IRF2BP1Q8IU81 584 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 PLA2G15Q8NCC3 412 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 FAM46DQ8NEK8 389 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 C9orf43Q8TAL5 461 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-221ENST00000557293 CXorf40AQ8TE69 158 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 WDR92Q96MX6 357 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 NUDT22Q9BRQ3 303 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 OSBPL1AQ9BXW6 950 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 ZYG11BQ9C0D3 744 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 SCAND2PQ9GZW5 306 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-221ENST00000557293 RAB6CQ9H0N0 254 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 PPARGC1AQ9UBK2 798 aaKnown RBP12.66□□□□□ -0.38
PSEN1-221ENST00000557293 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 KLQ9UEF7 1012 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
PSEN1-221ENST00000557293 ARHGEF17Q96PE2 2063 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-221ENST00000557293 K7EM74 188 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 MTSS1O43312 755 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 CPNE6O95741 557 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 F9P00740 461 aa12.65□□□□□ -0.38
PSEN1-221ENST00000557293 CD1CP29017 333 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms