RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 BRMS1LQ5PSV4 323 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 FKBP15Q5T1M5 1219 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 USP30Q70CQ3 517 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 ERICH1Q86X53 443 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 ZNF677Q86XU0 584 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 HDDC3Q8N4P3 179 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 NT5C3BQ969T7 300 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 PGAP3Q96FM1 320 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 AHCYL2Q96HN2 611 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 NPY6RQ99463 290 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 ZFYVE21Q9BQ24 234 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 RSPH9Q9H1X1 276 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 VPS16Q9H269 839 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 SLC32A1Q9H598 525 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 WDCPQ9H6R7 721 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 SSU72Q9NP77 194 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 ANO10Q9NW15 660 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 B4GALT6Q9UBX8 382 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 STAP1Q9ULZ2 295 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 ERVW-1Q9UQF0 538 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 NCKAP1Q9Y2A7 1128 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 PAXBP1Q9Y5B6 917 aa10.09□□□□□ -0.79
HNRNPC-228ENST00000557033 ITIH6Q6UXX5 1313 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 SYNJ2BP-COX16A0A087WUM0 186 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 A0A1B0GVM2 712 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 TCAF2A6NFQ2 919 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 MEI4A8MW99 385 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 F8VZ95 297 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 OPHN1O60890 802 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 GRAP2O75791 330 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 MBD3O95983 291 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 MT-CO1P00395 513 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 CXCR3P49682 368 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 NOVA1P51513 510 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 NME3Q13232 169 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 KRT31Q15323 416 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 SLC25A52Q3SY17 297 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 C9orf64Q5T6V5 341 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 DCAF12L1Q5VU92 463 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF776Q68DI1 518 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 FBXL22Q6P050 247 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 ARCQ7LC44 396 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 MTDHQ86UE4 582 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 APCDD1Q8J025 514 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 CCAR2Q8N163 923 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 C1orf162Q8NEQ5 155 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 ANKRD20A12PQ8NF67 263 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 CLIP3Q96DZ5 547 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 C1orf74Q96LT6 269 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 GTPBP2Q9BX10 602 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 ASPNQ9BXN1 380 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 BTBD1Q9H0C5 482 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 SGK2Q9HBY8 427 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 TAB2Q9NYJ8 693 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 COX16Q9P0S2 106 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 NPFFR2Q9Y5X5 522 aa10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 MUC22E2RYF6 1773 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-228ENST00000557033 PI4KAP42356 2102 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 EDDM13A0A1B0GTR0 161 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 BCAT2O15382 392 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 CLDN11O75508 207 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ITIH2P19823 946 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 LPOP22079 712 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ACSL1P33121 698 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 HTR3AP46098 478 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 RNASE9P60153 205 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 GPR85P60893 370 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 SHC2P98077 582 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 OCRLQ01968 901 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ZNF177Q13360 481 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 HNRNPDQ14103 355 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ZFYVE27Q5T4F4 411 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 IL27RAQ6UWB1 636 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 MMS22LQ6ZRQ5 1243 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 PIP4P1Q86T03 277 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 FAM124AQ86V42 546 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 XYLT1Q86Y38 959 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 MINDY1Q8N5J2 469 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 CHTF18Q8WVB6 975 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 RNF141Q8WVD5 230 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 IGSF8Q969P0 613 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 SCYL1Q96KG9 808 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 RPRD1AQ96P16 312 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 TKTL2Q9H0I9 626 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 GANQ9H2C0 597 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ARHGEF38Q9NXL2 777 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 LIMA1Q9UHB6 759 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 SLCO3A1Q9UIG8 710 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 ANGPTL2Q9UKU9 493 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 PCOLCE2Q9UKZ9 415 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 TBC1D30Q9Y2I9 924 aa10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 SF3B6Q9Y3B4 125 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-228ENST00000557033 HS3ST4Q9Y661 456 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms