RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SLC17A9Q9BYT1 436 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
LINC00239-201ENST00000556973 RBM22Q9NW64 420 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC00239-201ENST00000556973 TRIM10Q9UDY6 481 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 AMFRQ9UKV5 643 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 EFR3BQ9Y2G0 817 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 SLCO1B1Q9Y6L6 691 aa10.79□□□□□ -0.68
LINC00239-201ENST00000556973 TMEM131Q92545 1883 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TP53BP1Q12888 1972 aaPredicted RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 A0A1B0GVT2 93 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TTC24A2A3L6 582 aaPredicted RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TRAFD1O14545 582 aaPredicted RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 RIOK3O14730 519 aaKnown RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 WNT9AO14904 365 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 SLC31A1O15431 190 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 HTRA2O43464 458 aaPredicted RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 DFNA5O60443 496 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 MAGEC1O60732 1142 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 OPHN1O60890 802 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 SOCS5O75159 536 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 NEBLO76041 1014 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 CER1O95813 267 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 PAK4O96013 591 aaPredicted RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TGM2P21980 687 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 AKT2P31751 481 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 MAXP61244 160 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 DYNLT1P63172 113 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 BNC1Q01954 994 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 AP1B1Q10567 949 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 SLC14A1Q13336 389 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 PPP2R5EQ16537 467 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 HLA-BQ31612 363 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TMEM52BQ4KMG9 183 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TMEM259Q4ZIN3 620 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 KAZNQ674X7 775 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 ERAP2Q6P179 960 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 NPNTQ6UXI9 565 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 ZNF662Q6ZS27 426 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 PEX26Q7Z412 305 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 CXorf40AQ8TE69 158 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 KLK6Q92876 244 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 LENG8Q96PV6 779 aaPredicted RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 C1QTNF2Q9BXJ5 285 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 POLR1EQ9GZS1 481 aaKnown RBP10.78□□□□□ -0.68
LINC00239-201ENST00000556973 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 NOD2Q9HC29 1040 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 NT5MQ9NPB1 228 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 ATP8A1Q9Y2Q0 1164 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 PCDHGC4Q9Y5F7 938 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 SNX11Q9Y5W9 270 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 HS3ST3A1Q9Y663 406 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 FAM186AA6NE01 2351 aa10.78□□□□□ -0.68
LINC00239-201ENST00000556973 TRPM6Q9BX84 2022 aa10.77□□□□□ -0.68
LINC00239-201ENST00000556973 ZNF292O60281 2723 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 hCG_1818297A0A087WSY0 165 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 A0A0U1RQJ8 604 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 CFAP69A5D8W1 941 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 IGLON5A6NGN9 336 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 MIF4GDA9UHW6 222 aaKnown RBP10.77□□□□□ -0.69
LINC00239-201ENST00000556973 UPK3BL1B0FP48 263 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 UPK3BL2E5RIL1 263 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 TLR4O00206 839 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 SPINT1O43278 529 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 GJB3O75712 270 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 TM7SF2O76062 418 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 JCHAINP01591 159 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 WNT1P04628 370 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 CCDC175P0C221 793 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 ITIH2P19823 946 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 NFKBIAP25963 317 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 MARCKSL1P49006 195 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 IFI35P80217 286 aaPredicted RBP10.77□□□□□ -0.69
LINC00239-201ENST00000556973 CCZ1BP86790 482 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 CCZ1P86791 482 aaPredicted RBP10.77□□□□□ -0.69
LINC00239-201ENST00000556973 FGL2Q14314 439 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 KIF19Q2TAC6 998 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 UAP1L1Q3KQV9 507 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 SEL1L3Q68CR1 1132 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 ALG1LQ6GMV1 187 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 UBL4BQ8N7F7 174 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 PAF1Q8N7H5 531 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 LRRN4Q8WUT4 740 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 TFB1MQ8WVM0 346 aaKnown RBP10.77□□□□□ -0.69
LINC00239-201ENST00000556973 SPOCK2Q92563 424 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 ANP32BQ92688 251 aaKnown RBP10.77□□□□□ -0.69
LINC00239-201ENST00000556973 KLHDC7BQ96G42 594 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 NSMCE3Q96MG7 304 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 OLFM3Q96PB7 478 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 IL12RB2Q99665 862 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 SEMA3CQ99985 751 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 HEMGNQ9BXL5 484 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 PCDH12Q9NPG4 1184 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 SAE1Q9UBE0 346 aaPredicted RBP10.77□□□□□ -0.69
LINC00239-201ENST00000556973 GGT7Q9UJ14 662 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 PHTF1Q9UMS5 762 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 GUCA1BQ9UMX6 200 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 ITM2BQ9Y287 266 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 LRRK1Q38SD2 2015 aa10.77□□□□□ -0.69
LINC00239-201ENST00000556973 DCDC2BA2VCK2 349 aa10.76□□□□□ -0.69
LINC00239-201ENST00000556973 KCNK1O00180 336 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms