RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 IL21RQ9HBE5 538 aa23.08■■□□□ 1.29
TDP1-216ENST00000556867 FNDC3AQ9Y2H6 1198 aaKnown RBP23.08■■□□□ 1.29
TDP1-216ENST00000556867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.07■■□□□ 1.28
TDP1-216ENST00000556867 TRAFD1O14545 582 aaPredicted RBP23.07■■□□□ 1.28
TDP1-216ENST00000556867 CSRP1P21291 193 aaKnown RBP23.07■■□□□ 1.28
TDP1-216ENST00000556867 XPAP23025 273 aaPredicted RBP23.07■■□□□ 1.28
TDP1-216ENST00000556867 MARCKSL1P49006 195 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 ELP6Q0PNE2 266 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 STAT4Q14765 748 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 UGP2Q16851 508 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 ZNF423Q2M1K9 1284 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 ASB12Q8WXK4 309 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 SPOCK2Q92563 424 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 DESI2Q9BSY9 194 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 SLC17A9Q9BYT1 436 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 SCUBE2Q9NQ36 999 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 AMACRQ9UHK6 382 aa23.07■■□□□ 1.28
TDP1-216ENST00000556867 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.07■■□□□ 1.28
TDP1-216ENST00000556867 PCNX2A6NKB5 2137 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 IGLON5A6NGN9 336 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 TLR4O00206 839 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 SOCS5O75159 536 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 CD59P13987 128 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 NAP1L1P55209 391 aaKnown RBP23.06■■□□□ 1.28
TDP1-216ENST00000556867 NXPH1P58417 271 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 SPOCD1Q6ZMY3 1216 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 PIP4P1Q86T03 277 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 KRT35Q92764 455 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 NT5MQ9NPB1 228 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 FZD3Q9NPG1 666 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 PCDH12Q9NPG4 1184 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 CA5BQ9Y2D0 317 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 ATP8A1Q9Y2Q0 1164 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 HEY1Q9Y5J3 304 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 LRRK1Q38SD2 2015 aa23.06■■□□□ 1.28
TDP1-216ENST00000556867 TTC24A2A3L6 582 aaPredicted RBP23.05■■□□□ 1.28
TDP1-216ENST00000556867 H0Y8X5 98 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 HTRA2O43464 458 aaPredicted RBP23.05■■□□□ 1.28
TDP1-216ENST00000556867 DFNA5O60443 496 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 MAGEC1O60732 1142 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 ZRANB2O95218 330 aaKnown RBP eCLIP23.05■■□□□ 1.28
TDP1-216ENST00000556867 CTNNA1P35221 906 aaKnown RBP23.05■■□□□ 1.28
TDP1-216ENST00000556867 MAXP61244 160 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 PPIDQ08752 370 aaKnown RBP23.05■■□□□ 1.28
TDP1-216ENST00000556867 KIF5AQ12840 1032 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 TFDP2Q14188 446 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 TMEM52BQ4KMG9 183 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 TFDP3Q5H9I0 405 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 PPM1JQ5JR12 505 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 ALG1LQ6GMV1 187 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 CCDC13Q8IYE1 715 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 RCOR2Q8IZ40 523 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 LRRC57Q8N9N7 239 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 EXD1Q8NHP7 514 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 RBM41Q96IZ5 413 aaKnown RBP23.05■■□□□ 1.28
TDP1-216ENST00000556867 OLFM3Q96PB7 478 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 MYOCQ99972 504 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 POLR1EQ9GZS1 481 aaKnown RBP23.05■■□□□ 1.28
TDP1-216ENST00000556867 NOD2Q9HC29 1040 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 GDF3Q9NR23 364 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 TM7SF3Q9NS93 570 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 HAUS2Q9NVX0 235 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 PCDHGB2Q9Y5G2 931 aa23.05■■□□□ 1.28
TDP1-216ENST00000556867 A0A1W2PQ67 120 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 GRID2IPA4D2P6 1211 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 RIOK3O14730 519 aaKnown RBP23.04■■□□□ 1.28
TDP1-216ENST00000556867 PAK4O96013 591 aaPredicted RBP23.04■■□□□ 1.28
TDP1-216ENST00000556867 CCNB1P14635 433 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 ITIH2P19823 946 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 MMP12P39900 470 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 SGCGQ13326 291 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 PDK1Q15118 436 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 ERAP2Q6P179 960 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 NPNTQ6UXI9 565 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 GCNT7Q6ZNI0 430 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 ABI3BPQ7Z7G0 1075 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 CCNYQ8ND76 341 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 DENND6BQ8NEG7 585 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 FAM174AQ8TBP5 190 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 KIAA1524Q8TCG1 905 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 CXorf40AQ8TE69 158 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 LENG8Q96PV6 779 aaPredicted RBP23.04■■□□□ 1.28
TDP1-216ENST00000556867 LGMNQ99538 433 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 ERVMER34-1Q9H9K5 563 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 RBM22Q9NW64 420 aaKnown RBP eCLIP23.04■■□□□ 1.28
TDP1-216ENST00000556867 PCDHA3Q9Y5H8 950 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 HS3ST3A1Q9Y663 406 aa23.04■■□□□ 1.28
TDP1-216ENST00000556867 hCG_1818297A0A087WSY0 165 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 RAD51BO15315 384 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 MMP20O60882 483 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 KCNK5O95279 499 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 KRT10P13645 584 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 CTNNA2P26232 953 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 CCT8P50990 548 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 POLR2LP62875 67 aaKnown RBP23.03■■□□□ 1.28
TDP1-216ENST00000556867 DYNLT1P63172 113 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 PPP2R5EQ16537 467 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 SPATS2Q86XZ4 545 aaKnown RBP23.03■■□□□ 1.28
TDP1-216ENST00000556867 PAF1Q8N7H5 531 aa23.03■■□□□ 1.28
TDP1-216ENST00000556867 CCDC112Q8NEF3 446 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms