RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 DARS2Q6PI48 645 aaKnown RBP17.64■□□□□ 0.41
SHMT2-225ENST00000556798 TTC7BQ86TV6 843 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 TTC13Q8NBP0 860 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 ECHDC3Q96DC8 303 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 MIR1-1HGQ9H1L0 117 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 PCED1AQ9H1Q7 454 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 SMOC1Q9H4F8 434 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 PREBQ9HCU5 417 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 TMEM74BQ9NUR3 256 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 KLHL8Q9P2G9 620 aaPredicted RBP17.64■□□□□ 0.41
SHMT2-225ENST00000556798 EIF2B4Q9UI10 523 aaKnown RBP17.64■□□□□ 0.41
SHMT2-225ENST00000556798 RAI2Q9Y5P3 530 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 SLCO1B1Q9Y6L6 691 aa17.64■□□□□ 0.41
SHMT2-225ENST00000556798 EP300Q09472 2414 aaPredicted RBP17.64■□□□□ 0.41
SHMT2-225ENST00000556798 RIF1Q5UIP0 2472 aaKnown RBP17.63■□□□□ 0.41
SHMT2-225ENST00000556798 TMEM131Q92545 1883 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 A0A1W2PQU0 124 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 BCLAF3A2AJT9 711 aaKnown RBP17.63■□□□□ 0.41
SHMT2-225ENST00000556798 UPK3BL1B0FP48 263 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 UPK3BL2E5RIL1 263 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 KCNN4O15554 427 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 MTSS1O43312 755 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 HTRA2O43464 458 aaPredicted RBP17.63■□□□□ 0.41
SHMT2-225ENST00000556798 GFRA3O60609 400 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 SOCS5O75159 536 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 FGGP02679 453 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 MMP2P08253 660 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 NFKB1P19838 968 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 GNG11P61952 73 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 SPEM2Q0P670 501 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 UGP2Q16851 508 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 SYCP2LQ5T4T6 812 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 SEL1L3Q68CR1 1132 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 BRAT1Q6PJG6 821 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 ZNF567Q8N184 647 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 C1orf54Q8WWF1 131 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 KLK6Q92876 244 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 TEKT5Q96M29 485 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 WDR24Q96S15 920 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 KDM4CQ9H3R0 1056 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 GLOD4Q9HC38 313 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 PCDH12Q9NPG4 1184 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 PILRBQ9UKJ0 227 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 DNPEPQ9ULA0 475 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 PCDHB9Q9Y5E1 797 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 FAM186AA6NE01 2351 aa17.63■□□□□ 0.41
SHMT2-225ENST00000556798 C10orf142B7Z368 130 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 NEMP1O14524 444 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 AREL1O15033 823 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 CPP00450 1065 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 SERPINF2P08697 491 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 CD68P34810 354 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 SKOR1P84550 965 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 SIX1Q15475 284 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 WDR45BQ5MNZ6 344 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 TRIM69Q86WT6 500 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 ZCCHC9Q8N567 271 aaKnown RBP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 SLC35B2Q8TB61 432 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 HCAR2Q8TDS4 363 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 RUBCNQ92622 972 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 RAB7BQ96AH8 199 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 IMP4Q96G21 291 aaKnown RBP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 MS4A14Q96JA4 679 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 RBM15Q96T37 977 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 ORAI3Q9BRQ5 295 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 TDRD1Q9BXT4 1180 aaKnown RBP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 EBF2Q9HAK2 575 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 ZFR2Q9UPR6 939 aaKnown RBP17.62■□□□□ 0.41
SHMT2-225ENST00000556798 PCDHGA5Q9Y5G8 931 aa17.62■□□□□ 0.41
SHMT2-225ENST00000556798 PCDH15Q96QU1 1955 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PATE3B3GLJ2 98 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 AP1G1O43747 822 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PGLSO95336 258 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PDHA1P08559 390 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PRLRP16471 622 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 CES1P23141 567 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 CCR5P51681 352 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 SNX1Q13596 522 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 LONRF2Q1L5Z9 754 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 ARMC12Q5T9G4 340 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 TCEAL6Q6IPX3 200 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PID1Q7Z2X4 250 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PRPF39Q86UA1 669 aaKnown RBP17.61■□□□□ 0.41
SHMT2-225ENST00000556798 HORMAD1Q86X24 394 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 SYT12Q8IV01 421 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 SPATA22Q8NHS9 363 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 COG1Q8WTW3 980 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 DNASE2BQ8WZ79 361 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 TCEAL3Q969E4 200 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 OSBPL9Q96SU4 736 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 VAT1Q99536 393 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 WRAP53Q9BUR4 548 aaKnown RBP17.61■□□□□ 0.41
SHMT2-225ENST00000556798 SLC25A51Q9H1U9 297 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 USP29Q9HBJ7 922 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 PARD6AQ9NPB6 346 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 UBP1Q9NZI7 540 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 CHKBQ9Y259 395 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 CACNA1EQ15878 2313 aa17.61■□□□□ 0.41
SHMT2-225ENST00000556798 A8MX80 341 aa17.6■□□□□ 0.41
SHMT2-225ENST00000556798 RIOK3O14730 519 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms