RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 NCDNQ9UBB6 729 aa8.91□□□□□ -0.98
PRKCH-222ENST00000556778 SEPT3Q9UH03 358 aa8.91□□□□□ -0.98
PRKCH-222ENST00000556778 PILRBQ9UKJ0 227 aa8.91□□□□□ -0.98
PRKCH-222ENST00000556778 RAB23Q9ULC3 237 aa8.91□□□□□ -0.98
PRKCH-222ENST00000556778 ZFR2Q9UPR6 939 aaKnown RBP8.91□□□□□ -0.98
PRKCH-222ENST00000556778 R3HDM2Q9Y2K5 976 aaKnown RBP8.91□□□□□ -0.98
PRKCH-222ENST00000556778 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.91□□□□□ -0.98
PRKCH-222ENST00000556778 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.91□□□□□ -0.98
PRKCH-222ENST00000556778 GPR179Q6PRD1 2367 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 WDR87Q6ZQQ6 2873 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 A0A1W2PQU0 124 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 TRAFD1O14545 582 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 KCNK3O14649 394 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 SIAH2O43255 324 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 PLRG1O43660 514 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 RNGTTO60942 597 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 MMP2P08253 660 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 PDHA1P08559 390 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 ADRB3P13945 408 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 PRLRP16471 622 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 ITGB7P26010 798 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 CXCR5P32302 372 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 MPLP40238 635 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 CSNK1DP48730 415 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 OTUD4Q01804 1114 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 WASHC5Q12768 1159 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 TRAF2Q12933 501 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 HNRNPDQ14103 355 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 TFDP2Q14188 446 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 FGL2Q14314 439 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 ZNF235Q14590 738 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 PDK1Q15118 436 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 PRKD1Q15139 912 aaPredicted RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 PPP2R5EQ16537 467 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 FBXL19Q6PCT2 694 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 KDELC2Q7Z4H8 507 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 VSIG1Q86XK7 387 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 TXLNBQ8N3L3 684 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 ZCCHC9Q8N567 271 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 OR2I1PQ8NGU4 316 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 OR2T34Q8NGX1 318 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 C1orf216Q8TAB5 229 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 ACTL9Q8TC94 416 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 P3H4Q92791 437 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 HDAC11Q96DB2 347 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 RBM41Q96IZ5 413 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 CALR3Q96L12 384 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 MYOCQ99972 504 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 SEMA3CQ99985 751 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 MGME1Q9BQP7 344 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 WRAP53Q9BUR4 548 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 CPEB1Q9BZB8 566 aaKnown RBP8.9□□□□□ -0.98
PRKCH-222ENST00000556778 BRD8Q9H0E9 1235 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 FZD3Q9NPG1 666 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 SEMA4GQ9NTN9 838 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 FZD4Q9ULV1 537 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 SCML1Q9UN30 329 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 TTLL3Q9Y4R7 772 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 FADS3Q9Y5Q0 445 aa8.9□□□□□ -0.98
PRKCH-222ENST00000556778 MIA3Q5JRA6 1907 aa8.9□□□□□ -0.99
PRKCH-222ENST00000556778 ATG2BQ96BY7 2078 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 IGLON5A6NGN9 336 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 MEI4A8MW99 385 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 MIF4GDA9UHW6 222 aaKnown RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 J3QL48 77 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 RAD51BO15315 384 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 SLC31A1O15431 190 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 MMP20O60882 483 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PCDH8O95206 1070 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PAK4O96013 591 aaPredicted RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 WNT1P04628 370 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 ZFXP17010 805 aaPredicted RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 CTPS1P17812 591 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 MX2P20592 715 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 TGM2P21980 687 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PTPN3P26045 913 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 RBL1P28749 1068 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 CD68P34810 354 aaPredicted RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 NR2C2P49116 596 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 CSNK1EP49674 416 aaKnown RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 RENBPP51606 427 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 NEK3P51956 506 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 CLDN2P57739 230 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 IFI35P80217 286 aaPredicted RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 BNC1Q01954 994 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 KLF1Q13351 362 aaPredicted RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 RPS6KA1Q15418 735 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 UGP2Q16851 508 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PRAMEF14Q5SWL7 426 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 CYP2U1Q7Z449 544 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PRUNE1Q86TP1 453 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PRPF39Q86UA1 669 aaKnown RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 C11orf74Q86VG3 221 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 LRRC49Q8IUZ0 686 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 SYT12Q8IV01 421 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 UBL4BQ8N7F7 174 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 SPATA22Q8NHS9 363 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 PDCD6IPQ8WUM4 868 aaKnown RBP8.89□□□□□ -0.99
PRKCH-222ENST00000556778 NSMCE1Q8WV22 266 aa8.89□□□□□ -0.99
PRKCH-222ENST00000556778 TFB1MQ8WVM0 346 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms