RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR6K2Q8NGY2 324 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 SAP25Q8TEE9 199 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 KLK6Q92876 244 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ARRDC3Q96B67 414 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 HMCESQ96FZ2 354 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 SYT11Q9BT88 431 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 ANP32EQ9BTT0 268 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 MAGEB5Q9BZ81 275 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 KLHL11Q9NVR0 708 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 CAPN11Q9UMQ6 739 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 WASF3Q9UPY6 502 aa7.43□□□□□ -1.22
SCFD1-222ENST00000556768 NUP205Q92621 2012 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 FAM221BA6H8Z2 402 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 C1QTNF9BB2RNN3 333 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 H3BM21 787 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 DDX3XO00571 662 aaKnown RBP eCLIP7.42□□□□□ -1.221e-13■■■■□ 23.8
SCFD1-222ENST00000556768 WNT9AO14904 365 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 TOP3BO95985 862 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ATXN1LP0C7T5 689 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 NFKBIAP25963 317 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 EPHA8P29322 1005 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 MIPP30301 263 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 HNF1BP35680 557 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 SSR1P43307 286 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 RABIFP47224 123 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 HCAR3P49019 387 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 HNRNPKP61978 463 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 POLR2LP62875 67 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ELP6Q0PNE2 266 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 HADHQ16836 314 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ZSCAN23Q3MJ62 389 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ERAP2Q6P179 960 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 Q6ZSR6 202 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 RFX8Q6ZV50 586 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 PTAR1Q7Z6K3 402 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 SLCO6A1Q86UG4 719 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 DNAAF5Q86Y56 855 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 BBS5Q8N3I7 341 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 EID2Q8N6I1 236 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 TMEM145Q8NBT3 493 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 HCAR2Q8TDS4 363 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 CXorf40AQ8TE69 158 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 NSMCE1Q8WV22 266 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 CNDP2Q96KP4 475 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 KLHL32Q96NJ5 620 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 MYOCQ99972 504 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 FUCA2Q9BTY2 467 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 CPEB1Q9BZB8 566 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ISCUQ9H1K1 167 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ATP13A3Q9H7F0 1226 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 SP110Q9HB58 689 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 RAB6BQ9NRW1 208 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 IFNKQ9P0W0 207 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 IP6K2Q9UHH9 426 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 KLK13Q9UKR3 277 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 BTBD3Q9Y2F9 522 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 MFHAS1Q9Y4C4 1052 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 PCDHGA1Q9Y5H4 931 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 FADS3Q9Y5Q0 445 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 ASCC3Q8N3C0 2202 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 DSPP15924 2871 aaKnown RBP7.42□□□□□ -1.22
SCFD1-222ENST00000556768 PI4KAP42356 2102 aa7.42□□□□□ -1.22
SCFD1-222ENST00000556768 IGLON5A6NGN9 336 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 H3BRJ5 948 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 DFFAO00273 331 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ENC1O14682 589 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 TM7SF2O76062 418 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CD160O95971 181 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 JUPP14923 745 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 SERPINB6P35237 376 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 PAPOLAP51003 745 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 RENBPP51606 427 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 THOP1P52888 689 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 OGDHQ02218 1023 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ILKQ13418 452 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 PTK2BQ14289 1009 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 RFTN1Q14699 578 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 C11orf91Q3C1V1 193 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CCDC122Q5T0U0 273 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ATXN7L2Q5T6C5 722 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 SEL1L3Q68CR1 1132 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ALKBH5Q6P6C2 394 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 BRAT1Q6PJG6 821 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 TMCO3Q6UWJ1 677 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 PARS2Q7L3T8 475 aaKnown RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 KDF1Q8NAX2 398 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 BAHD1Q8TBE0 780 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF641Q96N77 438 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 LENG8Q96PV6 779 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 DUSP23Q9BVJ7 150 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 CINPQ9BW66 212 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-222ENST00000556768 FZD3Q9NPG1 666 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 HAUS2Q9NVX0 235 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 DNAJC28Q9NX36 388 aa7.41□□□□□ -1.22
SCFD1-222ENST00000556768 DKK3Q9UBP4 350 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms