RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 HORMAD1Q86X24 394 aa24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 ECHDC3Q96DC8 303 aa24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 IL12RB2Q99665 862 aa24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 HERPUD2Q9BSE4 406 aa24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 POLR1EQ9GZS1 481 aaKnown RBP24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 KCNF1Q9H3M0 494 aa24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 TM9SF3Q9HD45 589 aa24.81■■□□□ 1.56
SDR39U1-221ENST00000556707 LNP1A1A4G5 178 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 APOC4-APOC2K7ER74 178 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 TRAFD1O14545 582 aaPredicted RBP24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 SPINT1O43278 529 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 TSPAN6O43657 245 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 JCHAINP01591 159 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 APOC2P02655 101 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 XPAP23025 273 aaPredicted RBP24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 ITKQ08881 620 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 UGP2Q16851 508 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 ZNF284Q2VY69 593 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 FEM1CQ96JP0 617 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 ALS2CR12Q96Q35 445 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 SEMA3CQ99985 751 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 ZFR2Q9UPR6 939 aaKnown RBP24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 DMTF1Q9Y222 760 aa24.8■■□□□ 1.56
SDR39U1-221ENST00000556707 CNOT1A5YKK6 2376 aaKnown RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 UPK3BL1B0FP48 263 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 UPK3BL2E5RIL1 263 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 NEMP1O14524 444 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 HTRA2O43464 458 aaPredicted RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 SOCS5O75159 536 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 HLA-DQB2P05538 268 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 CES1P23141 567 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 AFF3P51826 1226 aaKnown RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 RACK1P63244 317 aaKnown RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 PRKD1Q15139 912 aaPredicted RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 TMEM259Q4ZIN3 620 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 SETMARQ53H47 684 aaPredicted RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 LRRC73Q5JTD7 316 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 CCDC181Q5TID7 509 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 KIAA1161Q6NSJ0 714 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 AADACL2Q6P093 401 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 ZSCAN30Q86W11 494 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 ZSWIM9Q86XI8 627 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 TFB1MQ8WVM0 346 aaKnown RBP24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 HAUS1Q96CS2 278 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 RXFP3Q9NSD7 469 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 GGT7Q9UJ14 662 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 ITM2BQ9Y287 266 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 ATP8A1Q9Y2Q0 1164 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 TMEM131Q92545 1883 aa24.79■■□□□ 1.56
SDR39U1-221ENST00000556707 TJP3O95049 919 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 RPS21P63220 83 aaKnown RBP24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 ARHGAP8P85298 464 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 ZBTB17Q13105 803 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 ZNF211Q13398 564 aaPredicted RBP24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 SEL1L3Q68CR1 1132 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 B4GALNT4Q76KP1 1039 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 SPOCK2Q92563 424 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 SERAC1Q96JX3 654 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 PCDH12Q9NPG4 1184 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 TTLL3Q9Y4R7 772 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 PCDHGC4Q9Y5F7 938 aa24.78■■□□□ 1.56
SDR39U1-221ENST00000556707 GDF9O60383 454 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 ITIH2P19823 946 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 GRIA4P48058 902 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 CSNK1EP49674 416 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 POLR2LP62875 67 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 DSC2Q02487 901 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 ELP6Q0PNE2 266 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 NOMO1Q15155 1222 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 TEAD4Q15561 434 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 MEI1Q5TIA1 1274 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 NAPEPLDQ6IQ20 393 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 ZC3H18Q86VM9 953 aaKnown RBP24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 PAF1Q8N7H5 531 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 CNTD1Q8N815 330 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 TRIM58Q8NG06 486 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 ARRDC2Q8TBH0 407 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 KLK6Q92876 244 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 SLC6A18Q96N87 628 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 EDEM2Q9BV94 578 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 FSCN3Q9NQT6 498 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 SEPT10Q9P0V9 454 aa24.77■■□□□ 1.56
SDR39U1-221ENST00000556707 A0A1W2PQ67 120 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 HACD1B0YJ81 288 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 SLC31A1O15431 190 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 SYPP08247 313 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 ENGP17813 658 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 NIPAL4Q0D2K0 466 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 TRAF2Q12933 501 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 XRCC4Q13426 336 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 ACTL9Q8TC94 416 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 QKIQ96PU8 341 aaKnown RBP eCLIP24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 SLC17A9Q9BYT1 436 aa24.76■■□□□ 1.55
SDR39U1-221ENST00000556707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.75■■□□□ 1.55
SDR39U1-221ENST00000556707 IGLON5A6NGN9 336 aa24.75■■□□□ 1.55
SDR39U1-221ENST00000556707 PRAMEF26H0Y7S4 382 aa24.75■■□□□ 1.55
SDR39U1-221ENST00000556707 ARHGAP33O14559 1287 aa24.75■■□□□ 1.55
SDR39U1-221ENST00000556707 RIOK3O14730 519 aaKnown RBP24.75■■□□□ 1.55
SDR39U1-221ENST00000556707 WNT9AO14904 365 aa24.75■■□□□ 1.55
SDR39U1-221ENST00000556707 MTSS1O43312 755 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms