RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 NFKB2Q00653 900 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 NRG1Q02297 640 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-221ENST00000556571 ZFP36L1Q07352 338 aaKnown RBP12.02□□□□□ -0.49
ACTN1-221ENST00000556571 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.49
ACTN1-221ENST00000556571 LRRC14Q15048 493 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 IRF4Q15306 451 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 TBR1Q16650 682 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 ALG11Q2TAA5 492 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 COLEC12Q5KU26 742 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 RWDD4Q6NW29 188 aaKnown RBP12.02□□□□□ -0.49
ACTN1-221ENST00000556571 ARCQ7LC44 396 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 XYLT1Q86Y38 959 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 TSACCQ96A04 125 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-221ENST00000556571 CFAP57Q96MR6 1250 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 GDAP1L1Q96MZ0 367 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 DKK3Q9UBP4 350 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 TMEM59LQ9UK28 342 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 APPL1Q9UKG1 709 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 A0A1W2PQC6 194 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 ZSCAN5CA6NGD5 496 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-221ENST00000556571 KDELR3O43731 214 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 RAMP2O60895 175 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 TIMP2P16035 220 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 PNLIPP16233 465 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-221ENST00000556571 CD82P27701 267 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 ADRA1BP35368 520 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 SRP54P61011 504 aaKnown RBP12.01□□□□□ -0.49
ACTN1-221ENST00000556571 ELP6Q0PNE2 266 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 NFATC4Q14934 902 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 TMEM52BQ4KMG9 183 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 LRRC73Q5JTD7 316 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 ATXN7L2Q5T6C5 722 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-221ENST00000556571 MANEALQ5VSG8 457 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 ENPP7Q6UWV6 458 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 RD3Q7Z3Z2 195 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 NLRP14Q86W24 1093 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 CCNJLQ8IV13 435 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 MSANTD4Q8NCY6 345 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 GPR156Q8NFN8 814 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 CASKIN2Q8WXE0 1202 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 CMKLR1Q99788 373 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 WRAP53Q9BUR4 548 aaKnown RBP12.01□□□□□ -0.49
ACTN1-221ENST00000556571 TTYH3Q9C0H2 523 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 SIX2Q9NPC8 291 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 NDFIP2Q9NV92 336 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 TMEM248Q9NWD8 314 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 MFHAS1Q9Y4C4 1052 aa12.01□□□□□ -0.49
ACTN1-221ENST00000556571 DOCK4Q8N1I0 1966 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 PRAMEF33A0A0G2JMD5 474 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 GOLGA8SH3BPF8 625 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 BUB1O43683 1085 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 PRAMEF10O60809 474 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 LSM8O95777 96 aaKnown RBP12□□□□□ -0.49
ACTN1-221ENST00000556571 IGSF6O95976 241 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 TNFP01375 233 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 CYP11B1P15538 503 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 GLB1P16278 677 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 ITIH2P19823 946 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 ITIH1P19827 911 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 UBE2HP62256 183 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 ATP11AP98196 1134 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 INPP5AQ14642 412 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 WSCD2Q2TBF2 565 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 INO80DQ53TQ3 878 aaPredicted RBP12□□□□□ -0.49
ACTN1-221ENST00000556571 TRNP1Q6NT89 227 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 OGFOD3Q6PK18 319 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 LEKR1Q6ZMV7 388 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 VASH2Q86V25 355 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 ZFAND4Q86XD8 727 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 DTX1Q86Y01 620 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 Q8N9G6 341 aaPredicted RBP12□□□□□ -0.49
ACTN1-221ENST00000556571 HCAR2Q8TDS4 363 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 USP7Q93009 1102 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 RBM15Q96T37 977 aaKnown RBP eCLIP12□□□□□ -0.49
ACTN1-221ENST00000556571 APOOQ9BUR5 198 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 B3GNT4Q9C0J1 378 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 SLC25A18Q9H1K4 315 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 GEMIN8Q9NWZ8 242 aaKnown RBP12□□□□□ -0.49
ACTN1-221ENST00000556571 KLQ9UEF7 1012 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 SEPT3Q9UH03 358 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 RWDD2AQ9UIY3 292 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 AJAP1Q9UKB5 411 aaPredicted RBP12□□□□□ -0.49
ACTN1-221ENST00000556571 DGKBQ9Y6T7 804 aa12□□□□□ -0.49
ACTN1-221ENST00000556571 TMCC1O94876 653 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-221ENST00000556571 RHOAP61586 193 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 ARHGEF7Q14155 803 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 AGERQ15109 404 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 TCEA2Q15560 299 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 C2CD6Q53TS8 623 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 CERCAMQ5T4B2 595 aa11.99□□□□□ -0.49
ACTN1-221ENST00000556571 TMEM164Q5U3C3 297 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms